Protein–RNA interactions for Protein: Q03390

VPS60, Vacuolar protein-sorting-associated protein 60, yeastyeast

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS60Q03390 ADH6YMR318C 1083 nt8.04□□□□□ -1.12
VPS60Q03390 AGP2YBR132C 1791 nt8.04□□□□□ -1.12
VPS60Q03390 YMR206WYMR206W 942 nt8.03□□□□□ -1.12
VPS60Q03390 LIP5YOR196C 1245 nt8.03□□□□□ -1.12
VPS60Q03390 NUP57YGR119C 1626 nt8.03□□□□□ -1.12
VPS60Q03390 TGA1tA(UGC)A 73 nt8.02□□□□□ -1.13
VPS60Q03390 tA(UGC)EtA(UGC)E 73 nt8.02□□□□□ -1.13
VPS60Q03390 tA(UGC)GtA(UGC)G 73 nt8.02□□□□□ -1.13
VPS60Q03390 tA(UGC)LtA(UGC)L 73 nt8.02□□□□□ -1.13
VPS60Q03390 tA(UGC)OtA(UGC)O 73 nt8.02□□□□□ -1.13
VPS60Q03390 YBR232CYBR232C 360 nt8.01□□□□□ -1.13
VPS60Q03390 ERG24YNL280C 1317 nt8.01□□□□□ -1.13
VPS60Q03390 PAU15YIR041W 375 nt8□□□□□ -1.13
VPS60Q03390 YLR112WYLR112W 420 nt8□□□□□ -1.13
VPS60Q03390 RPS6AYPL090C 711 nt8□□□□□ -1.13
VPS60Q03390 RPS6BYBR181C 711 nt8□□□□□ -1.13
VPS60Q03390 AFG3YER017C 2286 nt8□□□□□ -1.13
VPS60Q03390 YPR084WYPR084W 1371 nt7.99□□□□□ -1.13
VPS60Q03390 STE3YKL178C 1413 nt7.99□□□□□ -1.13
VPS60Q03390 CDC3YLR314C 1563 nt7.99□□□□□ -1.13
VPS60Q03390 RRN10YBL025W 438 nt7.99□□□□□ -1.13
VPS60Q03390 BAP3YDR046C 1815 nt7.99□□□□□ -1.13
VPS60Q03390 VTS1YOR359W 1572 nt7.98□□□□□ -1.13
VPS60Q03390 OPI1YHL020C 1215 nt7.98□□□□□ -1.13
VPS60Q03390 ACO1YLR304C 2337 nt7.98□□□□□ -1.13
VPS60Q03390 SNU66YOR308C 1764 nt7.97□□□□□ -1.13
VPS60Q03390 YML034C-AYML034C-A 399 nt7.97□□□□□ -1.13
VPS60Q03390 EXG2YDR261C 1689 nt7.97□□□□□ -1.13
VPS60Q03390 ATP2YJR121W 1536 nt7.95□□□□□ -1.14
VPS60Q03390 YER156CYER156C 1017 nt7.95□□□□□ -1.14
VPS60Q03390 FCY1YPR062W 477 nt7.95□□□□□ -1.14
VPS60Q03390 YNL295WYNL295W 1575 nt7.95□□□□□ -1.14
VPS60Q03390 NUP84YDL116W 2181 nt7.95□□□□□ -1.14
VPS60Q03390 INP54YOL065C 1155 nt7.94□□□□□ -1.14
VPS60Q03390 SMK1YPR054W 1167 nt7.94□□□□□ -1.14
VPS60Q03390 PET18YCR020C 648 nt7.93□□□□□ -1.14
VPS60Q03390 GET2YER083C 858 nt7.93□□□□□ -1.14
VPS60Q03390 tS(GCU)LtS(GCU)L 80 nt7.93□□□□□ -1.14
VPS60Q03390 BDS1YOL164W 1941 nt7.92□□□□□ -1.14
VPS60Q03390 ERG12YMR208W 1332 nt7.92□□□□□ -1.14
VPS60Q03390 RRP43YCR035C 1185 nt7.9□□□□□ -1.14
VPS60Q03390 SKY1YMR216C 2229 nt7.9□□□□□ -1.15
VPS60Q03390 CYB2YML054C 1776 nt7.89□□□□□ -1.15
VPS60Q03390 RSP5YER125W 2430 nt7.89□□□□□ -1.15
VPS60Q03390 NTG1YAL015C 1200 nt7.89□□□□□ -1.15
VPS60Q03390 MAS1YLR163C 1389 nt7.88□□□□□ -1.15
VPS60Q03390 RAD51YER095W 1203 nt7.88□□□□□ -1.15
VPS60Q03390 EMP65YER140W 1671 nt7.88□□□□□ -1.15
VPS60Q03390 ECM30YLR436C 3825 nt7.88□□□□□ -1.15
VPS60Q03390 CLN1YMR199W 1641 nt7.87□□□□□ -1.15
VPS60Q03390 MCH2YKL221W 1422 nt7.86□□□□□ -1.15
VPS60Q03390 SUN4YNL066W 1263 nt7.85□□□□□ -1.15
VPS60Q03390 ARC35YNR035C 1029 nt7.85□□□□□ -1.15
VPS60Q03390 YPT10YBR264C 600 nt7.85□□□□□ -1.15
VPS60Q03390 RDR1YOR380W 1641 nt7.85□□□□□ -1.15
VPS60Q03390 YCR061WYCR061W 1896 nt7.84□□□□□ -1.15
VPS60Q03390 YIL168WYIL168W 384 nt7.84□□□□□ -1.15
VPS60Q03390 YJL160CYJL160C 864 nt7.84□□□□□ -1.15
VPS60Q03390 MHP1YJL042W 4197 nt7.84□□□□□ -1.15
VPS60Q03390 CDC7YDL017W 1524 nt7.83□□□□□ -1.16
VPS60Q03390 GRH1YDR517W 1119 nt7.83□□□□□ -1.16
VPS60Q03390 MTR3YGR158C 753 nt7.83□□□□□ -1.16
VPS60Q03390 SNT309YPR101W 528 nt7.83□□□□□ -1.16
VPS60Q03390 MFT1YML062C 1179 nt7.82□□□□□ -1.16
VPS60Q03390 CMK2YOL016C 1344 nt7.81□□□□□ -1.16
VPS60Q03390 RPL2BYIL018W 765 nt7.81□□□□□ -1.16
VPS60Q03390 GSH1YJL101C 2037 nt7.81□□□□□ -1.16
VPS60Q03390 SPS1YDR523C 1473 nt7.81□□□□□ -1.16
VPS60Q03390 YLL066CYLL066C 3618 nt7.8□□□□□ -1.16
VPS60Q03390 PSA1YDL055C 1086 nt7.8□□□□□ -1.16
VPS60Q03390 PHO85YPL031C 918 nt7.8□□□□□ -1.16
VPS60Q03390 YJL045WYJL045W 1905 nt7.8□□□□□ -1.16
VPS60Q03390 DSC3YOR223W 879 nt7.79□□□□□ -1.16
VPS60Q03390 AMN1YBR158W 1650 nt7.79□□□□□ -1.16
VPS60Q03390 GPH1YPR160W 2709 nt7.79□□□□□ -1.16
VPS60Q03390 YMR074CYMR074C 438 nt7.78□□□□□ -1.16
VPS60Q03390 ERS1YCR075C 783 nt7.77□□□□□ -1.17
VPS60Q03390 CTF8YHR191C 402 nt7.77□□□□□ -1.17
VPS60Q03390 ECM38YLR299W 1983 nt7.77□□□□□ -1.17
VPS60Q03390 PGI1YBR196C 1665 nt7.76□□□□□ -1.17
VPS60Q03390 FPR2YDR519W 408 nt7.76□□□□□ -1.17
VPS60Q03390 OPI11YPR044C 354 nt7.76□□□□□ -1.17
VPS60Q03390 TDP1YBR223C 1635 nt7.76□□□□□ -1.17
VPS60Q03390 TAH11YJR046W 1815 nt7.75□□□□□ -1.17
VPS60Q03390 SUF3tG(CCC)D 72 nt7.75□□□□□ -1.17
VPS60Q03390 UTR5YEL035C 501 nt7.75□□□□□ -1.17
VPS60Q03390 YAL045CYAL045C 309 nt7.75□□□□□ -1.17
VPS60Q03390 YPR127WYPR127W 1038 nt7.75□□□□□ -1.17
VPS60Q03390 SPR1YOR190W 1338 nt7.75□□□□□ -1.17
VPS60Q03390 YJL064WYJL064W 396 nt7.74□□□□□ -1.17
VPS60Q03390 TOS2YGR221C 1869 nt7.74□□□□□ -1.17
VPS60Q03390 BDF2YDL070W 1917 nt7.74□□□□□ -1.17
VPS60Q03390 YBR241CYBR241C 1467 nt7.73□□□□□ -1.17
VPS60Q03390 CCT3YJL014W 1605 nt7.72□□□□□ -1.17
VPS60Q03390 SWM1YDR260C 513 nt7.72□□□□□ -1.17
VPS60Q03390 SKP1YDR328C 585 nt7.72□□□□□ -1.17
VPS60Q03390 ERV2YPR037C 591 nt7.72□□□□□ -1.17
VPS60Q03390 YEL023CYEL023C 2049 nt7.72□□□□□ -1.17
VPS60Q03390 GTT3YEL017W 1014 nt7.71□□□□□ -1.18
VPS60Q03390 HSP12YFL014W 330 nt7.71□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms