Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HSPG2P98160 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HSPG2P98160 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HSPG2P98160 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HSPG2P98160 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HSPG2P98160 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.1■□□□□ 0.17
HSPG2P98160 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HSPG2P98160 AC026202.3-201ENST00000600805 1127 ntBASIC16.1■□□□□ 0.17
HSPG2P98160 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HSPG2P98160 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HSPG2P98160 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HSPG2P98160 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
HSPG2P98160 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HSPG2P98160 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.1■□□□□ 0.17
HSPG2P98160 AC133552.2-201ENST00000619106 1032 ntBASIC16.1■□□□□ 0.17
HSPG2P98160 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HSPG2P98160 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HSPG2P98160 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HSPG2P98160 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.1■□□□□ 0.17
HSPG2P98160 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.1■□□□□ 0.17
HSPG2P98160 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HSPG2P98160 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.1■□□□□ 0.17
HSPG2P98160 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HSPG2P98160 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC16.09■□□□□ 0.17
HSPG2P98160 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HSPG2P98160 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.09■□□□□ 0.17
HSPG2P98160 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HSPG2P98160 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HSPG2P98160 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.08■□□□□ 0.16
HSPG2P98160 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HSPG2P98160 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HSPG2P98160 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HSPG2P98160 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HSPG2P98160 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HSPG2P98160 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HSPG2P98160 AC135983.2-203ENST00000454486 1613 ntBASIC16.08■□□□□ 0.16
HSPG2P98160 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HSPG2P98160 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HSPG2P98160 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.07■□□□□ 0.16
HSPG2P98160 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HSPG2P98160 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HSPG2P98160 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HSPG2P98160 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HSPG2P98160 AL161658.1-201ENST00000623641 1967 ntBASIC16.06■□□□□ 0.16
HSPG2P98160 MIR638-201ENST00000385237 100 ntBASIC16.05■□□□□ 0.16
HSPG2P98160 BHLHE23-202ENST00000612929 1109 ntBASIC16.05■□□□□ 0.16
HSPG2P98160 PVT1_1.1-201ENST00000615125 194 ntBASIC16.05■□□□□ 0.16
HSPG2P98160 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HSPG2P98160 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HSPG2P98160 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
HSPG2P98160 AC127502.1-201ENST00000399971 1502 ntBASIC16.05■□□□□ 0.16
HSPG2P98160 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.05■□□□□ 0.16
HSPG2P98160 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.05■□□□□ 0.16
HSPG2P98160 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC16.05■□□□□ 0.16
HSPG2P98160 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HSPG2P98160 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.04■□□□□ 0.16
HSPG2P98160 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HSPG2P98160 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HSPG2P98160 AC103724.3-201ENST00000564481 992 ntBASIC16.04■□□□□ 0.16
HSPG2P98160 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HSPG2P98160 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HSPG2P98160 SMPD5-203ENST00000639008 1464 ntBASIC16.03■□□□□ 0.16
HSPG2P98160 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC16.03■□□□□ 0.16
HSPG2P98160 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.02■□□□□ 0.16
HSPG2P98160 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.02■□□□□ 0.16
HSPG2P98160 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HSPG2P98160 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HSPG2P98160 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.02■□□□□ 0.16
HSPG2P98160 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
HSPG2P98160 AC010864.1-201ENST00000609407 1511 ntBASIC16.02■□□□□ 0.15
HSPG2P98160 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HSPG2P98160 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.02■□□□□ 0.15
HSPG2P98160 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HSPG2P98160 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HSPG2P98160 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.01■□□□□ 0.15
HSPG2P98160 RAP2CP1-202ENST00000605179 643 ntBASIC16.01■□□□□ 0.15
HSPG2P98160 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HSPG2P98160 AC126177.7-201ENST00000547904 679 ntBASIC16.01■□□□□ 0.15
HSPG2P98160 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
HSPG2P98160 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16■□□□□ 0.15
HSPG2P98160 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16■□□□□ 0.15
HSPG2P98160 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16■□□□□ 0.15
HSPG2P98160 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16■□□□□ 0.15
HSPG2P98160 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16■□□□□ 0.15
HSPG2P98160 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HSPG2P98160 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HSPG2P98160 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HSPG2P98160 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.99■□□□□ 0.15
HSPG2P98160 MIR6765-201ENST00000614092 87 ntBASIC15.99■□□□□ 0.15
HSPG2P98160 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.99■□□□□ 0.15
HSPG2P98160 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.99■□□□□ 0.15
HSPG2P98160 MIR4508-201ENST00000584178 70 ntBASIC15.99■□□□□ 0.15
HSPG2P98160 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HSPG2P98160 AC074183.2-201ENST00000623112 922 ntBASIC15.99■□□□□ 0.15
HSPG2P98160 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.98■□□□□ 0.15
HSPG2P98160 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HSPG2P98160 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HSPG2P98160 AC139795.1-202ENST00000500444 432 ntBASIC15.98■□□□□ 0.15
HSPG2P98160 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HSPG2P98160 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms