Protein–RNA interactions for Protein: P98066

TNFAIP6, Tumor necrosis factor-inducible gene 6 protein, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP6P98066 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFAIP6P98066 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TNFAIP6P98066 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFAIP6P98066 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNFAIP6P98066 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNFAIP6P98066 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNFAIP6P98066 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
TNFAIP6P98066 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.41■■□□□ 1.02
TNFAIP6P98066 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFAIP6P98066 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TNFAIP6P98066 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TNFAIP6P98066 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFAIP6P98066 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNFAIP6P98066 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.4■■□□□ 1.02
TNFAIP6P98066 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
TNFAIP6P98066 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TNFAIP6P98066 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TNFAIP6P98066 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 AC148477.6-201ENST00000623746 465 ntBASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFAIP6P98066 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
TNFAIP6P98066 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.38■■□□□ 1.01
TNFAIP6P98066 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFAIP6P98066 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNFAIP6P98066 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNFAIP6P98066 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TNFAIP6P98066 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TNFAIP6P98066 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TNFAIP6P98066 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.36■■□□□ 1.01
TNFAIP6P98066 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TNFAIP6P98066 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.35■■□□□ 1.01
TNFAIP6P98066 MIR219A2-201ENST00000608502 1504 ntBASIC21.35■■□□□ 1.01
TNFAIP6P98066 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TNFAIP6P98066 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TNFAIP6P98066 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.35■■□□□ 1.01
TNFAIP6P98066 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.34■■□□□ 1.01
TNFAIP6P98066 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TNFAIP6P98066 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.34■■□□□ 1.01
TNFAIP6P98066 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TNFAIP6P98066 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNFAIP6P98066 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.33■■□□□ 1.01
TNFAIP6P98066 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.33■■□□□ 1.01
TNFAIP6P98066 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.33■■□□□ 1.01
TNFAIP6P98066 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNFAIP6P98066 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFAIP6P98066 AC018358.1-201ENST00000631079 1402 ntBASIC21.32■■□□□ 1
TNFAIP6P98066 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TNFAIP6P98066 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TNFAIP6P98066 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.32■■□□□ 1
TNFAIP6P98066 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFAIP6P98066 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNFAIP6P98066 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.31■■□□□ 1
TNFAIP6P98066 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TNFAIP6P98066 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.31■■□□□ 1
TNFAIP6P98066 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.31■■□□□ 1
TNFAIP6P98066 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TNFAIP6P98066 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
TNFAIP6P98066 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNFAIP6P98066 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
TNFAIP6P98066 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNFAIP6P98066 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TNFAIP6P98066 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
TNFAIP6P98066 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFAIP6P98066 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFAIP6P98066 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFAIP6P98066 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFAIP6P98066 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFAIP6P98066 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.28■■□□□ 1
TNFAIP6P98066 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFAIP6P98066 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TNFAIP6P98066 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TNFAIP6P98066 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TNFAIP6P98066 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TNFAIP6P98066 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.27■■□□□ 1
TNFAIP6P98066 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.27■■□□□ 1
TNFAIP6P98066 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.27■■□□□ 1
TNFAIP6P98066 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
TNFAIP6P98066 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TNFAIP6P98066 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFAIP6P98066 AC142086.6-201ENST00000621154 1765 ntBASIC21.26■□□□□ 0.99
TNFAIP6P98066 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.26■□□□□ 0.99
TNFAIP6P98066 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.26■□□□□ 0.99
TNFAIP6P98066 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TNFAIP6P98066 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFAIP6P98066 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TNFAIP6P98066 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFAIP6P98066 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms