Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Slc9a3r1P70441 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Slc9a3r1P70441 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.99■■□□□ 1.11
Slc9a3r1P70441 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.99■■□□□ 1.11
Slc9a3r1P70441 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.99■■□□□ 1.11
Slc9a3r1P70441 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc9a3r1P70441 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Slc9a3r1P70441 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Slc9a3r1P70441 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.98■■□□□ 1.11
Slc9a3r1P70441 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc9a3r1P70441 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc9a3r1P70441 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc9a3r1P70441 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.97■■□□□ 1.11
Slc9a3r1P70441 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.97■■□□□ 1.11
Slc9a3r1P70441 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.97■■□□□ 1.11
Slc9a3r1P70441 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc9a3r1P70441 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.97■■□□□ 1.11
Slc9a3r1P70441 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc9a3r1P70441 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Slc9a3r1P70441 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Slc9a3r1P70441 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Slc9a3r1P70441 Gm9812-201ENSMUST00000061934 968 ntBASIC21.96■■□□□ 1.11
Slc9a3r1P70441 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.95■■□□□ 1.1
Slc9a3r1P70441 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Slc9a3r1P70441 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc9a3r1P70441 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc9a3r1P70441 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.93■■□□□ 1.1
Slc9a3r1P70441 Gm12366-201ENSMUST00000121722 873 ntBASIC21.93■■□□□ 1.1
Slc9a3r1P70441 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.93■■□□□ 1.1
Slc9a3r1P70441 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.93■■□□□ 1.1
Slc9a3r1P70441 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc9a3r1P70441 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Slc9a3r1P70441 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.93■■□□□ 1.1
Slc9a3r1P70441 Gm5786-201ENSMUST00000085368 882 ntBASIC21.93■■□□□ 1.1
Slc9a3r1P70441 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc9a3r1P70441 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Slc9a3r1P70441 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Slc9a3r1P70441 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc9a3r1P70441 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc9a3r1P70441 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.91■■□□□ 1.1
Slc9a3r1P70441 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc9a3r1P70441 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc9a3r1P70441 Gm27502-201ENSMUST00000183495 199 ntBASIC21.91■■□□□ 1.1
Slc9a3r1P70441 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc9a3r1P70441 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Slc9a3r1P70441 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Slc9a3r1P70441 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc9a3r1P70441 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.9■■□□□ 1.1
Slc9a3r1P70441 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc9a3r1P70441 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Slc9a3r1P70441 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.89■■□□□ 1.09
Slc9a3r1P70441 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Slc9a3r1P70441 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc9a3r1P70441 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc9a3r1P70441 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Slc9a3r1P70441 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.88■■□□□ 1.09
Slc9a3r1P70441 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc9a3r1P70441 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.88■■□□□ 1.09
Slc9a3r1P70441 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Slc9a3r1P70441 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Slc9a3r1P70441 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc9a3r1P70441 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc9a3r1P70441 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc9a3r1P70441 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc9a3r1P70441 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc9a3r1P70441 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Slc9a3r1P70441 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Slc9a3r1P70441 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc9a3r1P70441 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc9a3r1P70441 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Slc9a3r1P70441 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.86■■□□□ 1.09
Slc9a3r1P70441 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc9a3r1P70441 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc9a3r1P70441 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Slc9a3r1P70441 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc9a3r1P70441 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc9a3r1P70441 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Slc9a3r1P70441 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc9a3r1P70441 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Slc9a3r1P70441 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc9a3r1P70441 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Slc9a3r1P70441 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc9a3r1P70441 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Slc9a3r1P70441 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc9a3r1P70441 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Slc9a3r1P70441 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc9a3r1P70441 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc9a3r1P70441 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc9a3r1P70441 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc9a3r1P70441 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc9a3r1P70441 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc9a3r1P70441 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc9a3r1P70441 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Slc9a3r1P70441 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Slc9a3r1P70441 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Slc9a3r1P70441 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc9a3r1P70441 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Slc9a3r1P70441 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc9a3r1P70441 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc9a3r1P70441 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms