Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm3P62311 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Lsm3P62311 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Lsm3P62311 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm3P62311 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.98■□□□□ 0.95
Lsm3P62311 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm3P62311 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm3P62311 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm3P62311 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm3P62311 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm3P62311 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm3P62311 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Lsm3P62311 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm3P62311 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Lsm3P62311 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Lsm3P62311 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm3P62311 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm3P62311 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm3P62311 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm3P62311 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm3P62311 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm3P62311 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm3P62311 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm3P62311 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lsm3P62311 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm3P62311 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm3P62311 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm3P62311 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Lsm3P62311 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm3P62311 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm3P62311 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm3P62311 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lsm3P62311 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Lsm3P62311 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lsm3P62311 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.91■□□□□ 0.94
Lsm3P62311 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Lsm3P62311 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lsm3P62311 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lsm3P62311 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm3P62311 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.88■□□□□ 0.93
Lsm3P62311 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm3P62311 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm3P62311 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm3P62311 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm3P62311 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm3P62311 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lsm3P62311 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lsm3P62311 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm3P62311 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm3P62311 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Lsm3P62311 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm3P62311 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm3P62311 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm3P62311 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm3P62311 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm3P62311 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm3P62311 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm3P62311 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm3P62311 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Lsm3P62311 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm3P62311 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm3P62311 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm3P62311 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm3P62311 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm3P62311 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm3P62311 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm3P62311 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm3P62311 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm3P62311 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm3P62311 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm3P62311 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Lsm3P62311 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm3P62311 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm3P62311 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm3P62311 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm3P62311 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm3P62311 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.8■□□□□ 0.92
Lsm3P62311 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm3P62311 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm3P62311 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm3P62311 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm3P62311 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.79■□□□□ 0.92
Lsm3P62311 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm3P62311 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm3P62311 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lsm3P62311 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm3P62311 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm3P62311 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm3P62311 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm3P62311 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lsm3P62311 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm3P62311 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.78■□□□□ 0.92
Lsm3P62311 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm3P62311 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm3P62311 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
Lsm3P62311 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm3P62311 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm3P62311 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm3P62311 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm3P62311 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms