Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.02■□□□□ 0.79
Sec61a1P61620 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sec61a1P61620 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sec61a1P61620 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sec61a1P61620 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Sec61a1P61620 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sec61a1P61620 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sec61a1P61620 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sec61a1P61620 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20■□□□□ 0.79
Sec61a1P61620 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sec61a1P61620 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20■□□□□ 0.79
Sec61a1P61620 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sec61a1P61620 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sec61a1P61620 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sec61a1P61620 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sec61a1P61620 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Sec61a1P61620 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sec61a1P61620 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sec61a1P61620 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sec61a1P61620 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.97■□□□□ 0.79
Sec61a1P61620 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Sec61a1P61620 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.97■□□□□ 0.79
Sec61a1P61620 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Sec61a1P61620 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sec61a1P61620 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sec61a1P61620 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sec61a1P61620 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Sec61a1P61620 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Sec61a1P61620 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.96■□□□□ 0.79
Sec61a1P61620 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sec61a1P61620 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sec61a1P61620 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sec61a1P61620 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sec61a1P61620 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.95■□□□□ 0.78
Sec61a1P61620 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sec61a1P61620 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sec61a1P61620 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sec61a1P61620 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sec61a1P61620 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sec61a1P61620 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Sec61a1P61620 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sec61a1P61620 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sec61a1P61620 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sec61a1P61620 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Sec61a1P61620 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.93■□□□□ 0.78
Sec61a1P61620 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sec61a1P61620 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sec61a1P61620 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.91■□□□□ 0.78
Sec61a1P61620 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sec61a1P61620 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sec61a1P61620 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Sec61a1P61620 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sec61a1P61620 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sec61a1P61620 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sec61a1P61620 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sec61a1P61620 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sec61a1P61620 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Sec61a1P61620 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sec61a1P61620 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sec61a1P61620 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sec61a1P61620 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.89■□□□□ 0.77
Sec61a1P61620 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Sec61a1P61620 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sec61a1P61620 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sec61a1P61620 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sec61a1P61620 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.88■□□□□ 0.77
Sec61a1P61620 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sec61a1P61620 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sec61a1P61620 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sec61a1P61620 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Sec61a1P61620 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sec61a1P61620 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sec61a1P61620 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sec61a1P61620 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sec61a1P61620 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.86■□□□□ 0.77
Sec61a1P61620 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sec61a1P61620 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sec61a1P61620 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sec61a1P61620 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sec61a1P61620 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.84■□□□□ 0.77
Sec61a1P61620 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sec61a1P61620 Gm30023-201ENSMUST00000197970 889 ntBASIC19.84■□□□□ 0.77
Sec61a1P61620 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.84■□□□□ 0.77
Sec61a1P61620 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sec61a1P61620 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sec61a1P61620 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sec61a1P61620 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.84■□□□□ 0.77
Sec61a1P61620 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sec61a1P61620 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sec61a1P61620 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sec61a1P61620 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Sec61a1P61620 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sec61a1P61620 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sec61a1P61620 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sec61a1P61620 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sec61a1P61620 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sec61a1P61620 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.82■□□□□ 0.76
Sec61a1P61620 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sec61a1P61620 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Sec61a1P61620 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms