Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpl27P61358 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpl27P61358 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpl27P61358 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpl27P61358 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rpl27P61358 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rpl27P61358 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpl27P61358 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.47■□□□□ 0.87
Rpl27P61358 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rpl27P61358 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpl27P61358 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.46■□□□□ 0.87
Rpl27P61358 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpl27P61358 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpl27P61358 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpl27P61358 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rpl27P61358 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.45■□□□□ 0.86
Rpl27P61358 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpl27P61358 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpl27P61358 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpl27P61358 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpl27P61358 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpl27P61358 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.43■□□□□ 0.86
Rpl27P61358 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpl27P61358 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rpl27P61358 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpl27P61358 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl27P61358 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl27P61358 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl27P61358 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.42■□□□□ 0.86
Rpl27P61358 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl27P61358 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rpl27P61358 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl27P61358 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl27P61358 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl27P61358 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl27P61358 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl27P61358 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl27P61358 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rpl27P61358 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rpl27P61358 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rpl27P61358 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rpl27P61358 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rpl27P61358 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rpl27P61358 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.39■□□□□ 0.85
Rpl27P61358 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rpl27P61358 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rpl27P61358 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl27P61358 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl27P61358 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl27P61358 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl27P61358 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.38■□□□□ 0.85
Rpl27P61358 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl27P61358 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rpl27P61358 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpl27P61358 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpl27P61358 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.37■□□□□ 0.85
Rpl27P61358 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
Rpl27P61358 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rpl27P61358 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.37■□□□□ 0.85
Rpl27P61358 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpl27P61358 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rpl27P61358 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rpl27P61358 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rpl27P61358 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpl27P61358 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpl27P61358 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl27P61358 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl27P61358 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl27P61358 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl27P61358 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.35■□□□□ 0.85
Rpl27P61358 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl27P61358 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl27P61358 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl27P61358 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl27P61358 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl27P61358 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl27P61358 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl27P61358 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl27P61358 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpl27P61358 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.33■□□□□ 0.85
Rpl27P61358 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.33■□□□□ 0.85
Rpl27P61358 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rpl27P61358 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rpl27P61358 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpl27P61358 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpl27P61358 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Rpl27P61358 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.31■□□□□ 0.84
Rpl27P61358 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl27P61358 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl27P61358 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl27P61358 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl27P61358 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rpl27P61358 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl27P61358 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rpl27P61358 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rpl27P61358 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl27P61358 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl27P61358 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Rpl27P61358 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl27P61358 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms