Protein–RNA interactions for Protein: P56916

Gsc2, Homeobox protein goosecoid-2, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gsc2P56916 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Gsc2P56916 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gsc2P56916 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gsc2P56916 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gsc2P56916 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gsc2P56916 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gsc2P56916 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.22■□□□□ 0.67
Gsc2P56916 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gsc2P56916 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.22■□□□□ 0.67
Gsc2P56916 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.22■□□□□ 0.67
Gsc2P56916 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gsc2P56916 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gsc2P56916 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.21■□□□□ 0.67
Gsc2P56916 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.21■□□□□ 0.67
Gsc2P56916 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gsc2P56916 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gsc2P56916 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gsc2P56916 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gsc2P56916 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gsc2P56916 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gsc2P56916 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gsc2P56916 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gsc2P56916 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.19■□□□□ 0.66
Gsc2P56916 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gsc2P56916 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gsc2P56916 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.18■□□□□ 0.66
Gsc2P56916 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Gsc2P56916 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gsc2P56916 Particl-201ENSMUST00000205370 1560 ntBASIC19.18■□□□□ 0.66
Gsc2P56916 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gsc2P56916 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gsc2P56916 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gsc2P56916 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gsc2P56916 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gsc2P56916 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gsc2P56916 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gsc2P56916 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gsc2P56916 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gsc2P56916 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.15■□□□□ 0.66
Gsc2P56916 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gsc2P56916 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.14■□□□□ 0.66
Gsc2P56916 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Gsc2P56916 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gsc2P56916 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gsc2P56916 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gsc2P56916 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.14■□□□□ 0.65
Gsc2P56916 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gsc2P56916 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gsc2P56916 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.13■□□□□ 0.65
Gsc2P56916 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gsc2P56916 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Gsc2P56916 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gsc2P56916 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.12■□□□□ 0.65
Gsc2P56916 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gsc2P56916 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gsc2P56916 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gsc2P56916 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gsc2P56916 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Gsc2P56916 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gsc2P56916 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gsc2P56916 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Gsc2P56916 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Gsc2P56916 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gsc2P56916 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gsc2P56916 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gsc2P56916 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gsc2P56916 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gsc2P56916 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gsc2P56916 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Gsc2P56916 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gsc2P56916 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gsc2P56916 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gsc2P56916 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gsc2P56916 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gsc2P56916 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gsc2P56916 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.08■□□□□ 0.64
Gsc2P56916 Gm30023-201ENSMUST00000197970 889 ntBASIC19.08■□□□□ 0.64
Gsc2P56916 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gsc2P56916 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gsc2P56916 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gsc2P56916 Zfp131-205ENSMUST00000223812 663 ntBASIC19.07■□□□□ 0.64
Gsc2P56916 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gsc2P56916 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gsc2P56916 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gsc2P56916 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gsc2P56916 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Gsc2P56916 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Gsc2P56916 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gsc2P56916 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.06■□□□□ 0.64
Gsc2P56916 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Gsc2P56916 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gsc2P56916 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gsc2P56916 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gsc2P56916 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Gsc2P56916 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Gsc2P56916 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gsc2P56916 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.05■□□□□ 0.64
Gsc2P56916 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gsc2P56916 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Gsc2P56916 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms