Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn18P56857 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn18P56857 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn18P56857 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn18P56857 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.66■□□□□ 0.9
Cldn18P56857 Mir3960-201ENSMUST00000198213 73 ntBASIC20.66■□□□□ 0.9
Cldn18P56857 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.66■□□□□ 0.9
Cldn18P56857 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn18P56857 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn18P56857 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cldn18P56857 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cldn18P56857 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.65■□□□□ 0.9
Cldn18P56857 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn18P56857 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn18P56857 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn18P56857 Gm45364-201ENSMUST00000210883 159 ntBASIC20.63■□□□□ 0.89
Cldn18P56857 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn18P56857 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn18P56857 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn18P56857 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn18P56857 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn18P56857 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.62■□□□□ 0.89
Cldn18P56857 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.62■□□□□ 0.89
Cldn18P56857 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn18P56857 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.61■□□□□ 0.89
Cldn18P56857 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.61■□□□□ 0.89
Cldn18P56857 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.61■□□□□ 0.89
Cldn18P56857 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn18P56857 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cldn18P56857 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn18P56857 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn18P56857 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn18P56857 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn18P56857 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn18P56857 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn18P56857 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn18P56857 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn18P56857 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cldn18P56857 Gm6311-201ENSMUST00000073790 878 ntBASIC20.58■□□□□ 0.89
Cldn18P56857 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cldn18P56857 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cldn18P56857 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.57■□□□□ 0.88
Cldn18P56857 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn18P56857 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.57■□□□□ 0.88
Cldn18P56857 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cldn18P56857 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.57■□□□□ 0.88
Cldn18P56857 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn18P56857 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn18P56857 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn18P56857 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn18P56857 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn18P56857 Gm9812-201ENSMUST00000061934 968 ntBASIC20.56■□□□□ 0.88
Cldn18P56857 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn18P56857 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn18P56857 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cldn18P56857 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn18P56857 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn18P56857 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn18P56857 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn18P56857 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn18P56857 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Cldn18P56857 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cldn18P56857 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cldn18P56857 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.54■□□□□ 0.88
Cldn18P56857 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn18P56857 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.54■□□□□ 0.88
Cldn18P56857 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn18P56857 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.53■□□□□ 0.88
Cldn18P56857 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.53■□□□□ 0.88
Cldn18P56857 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn18P56857 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn18P56857 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn18P56857 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn18P56857 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn18P56857 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.52■□□□□ 0.88
Cldn18P56857 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cldn18P56857 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn18P56857 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cldn18P56857 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn18P56857 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn18P56857 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn18P56857 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cldn18P56857 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn18P56857 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn18P56857 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.48■□□□□ 0.87
Cldn18P56857 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn18P56857 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn18P56857 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.48■□□□□ 0.87
Cldn18P56857 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn18P56857 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Cldn18P56857 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn18P56857 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn18P56857 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn18P56857 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.46■□□□□ 0.87
Cldn18P56857 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn18P56857 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.46■□□□□ 0.87
Cldn18P56857 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn18P56857 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.46■□□□□ 0.87
Cldn18P56857 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Cldn18P56857 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms