Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx4P53776 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx4P53776 Particl-201ENSMUST00000205370 1560 ntBASIC19.25■□□□□ 0.67
Lhx4P53776 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lhx4P53776 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Lhx4P53776 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx4P53776 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx4P53776 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx4P53776 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.23■□□□□ 0.67
Lhx4P53776 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Lhx4P53776 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx4P53776 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Lhx4P53776 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx4P53776 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx4P53776 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx4P53776 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx4P53776 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx4P53776 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx4P53776 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx4P53776 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx4P53776 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx4P53776 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx4P53776 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.2■□□□□ 0.66
Lhx4P53776 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.2■□□□□ 0.66
Lhx4P53776 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx4P53776 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx4P53776 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Lhx4P53776 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.19■□□□□ 0.66
Lhx4P53776 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Lhx4P53776 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lhx4P53776 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx4P53776 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx4P53776 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Lhx4P53776 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.17■□□□□ 0.66
Lhx4P53776 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx4P53776 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx4P53776 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx4P53776 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx4P53776 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx4P53776 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx4P53776 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx4P53776 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Lhx4P53776 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lhx4P53776 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx4P53776 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.15■□□□□ 0.66
Lhx4P53776 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.15■□□□□ 0.66
Lhx4P53776 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx4P53776 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx4P53776 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lhx4P53776 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx4P53776 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx4P53776 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx4P53776 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx4P53776 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx4P53776 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx4P53776 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx4P53776 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx4P53776 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx4P53776 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx4P53776 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx4P53776 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx4P53776 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx4P53776 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lhx4P53776 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx4P53776 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Lhx4P53776 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Lhx4P53776 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx4P53776 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx4P53776 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx4P53776 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.09■□□□□ 0.65
Lhx4P53776 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx4P53776 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx4P53776 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx4P53776 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx4P53776 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx4P53776 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx4P53776 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lhx4P53776 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx4P53776 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Lhx4P53776 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Lhx4P53776 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx4P53776 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx4P53776 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.07■□□□□ 0.64
Lhx4P53776 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx4P53776 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Lhx4P53776 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx4P53776 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Lhx4P53776 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx4P53776 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.06■□□□□ 0.64
Lhx4P53776 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Lhx4P53776 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx4P53776 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx4P53776 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx4P53776 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx4P53776 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx4P53776 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx4P53776 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx4P53776 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lhx4P53776 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.02■□□□□ 0.64
Lhx4P53776 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms