Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pdx1P52946 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Pdx1P52946 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Pdx1P52946 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.74■■□□□ 1.23
Pdx1P52946 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pdx1P52946 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pdx1P52946 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.73■■□□□ 1.23
Pdx1P52946 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pdx1P52946 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pdx1P52946 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.72■■□□□ 1.23
Pdx1P52946 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pdx1P52946 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pdx1P52946 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.72■■□□□ 1.23
Pdx1P52946 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pdx1P52946 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pdx1P52946 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Pdx1P52946 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Pdx1P52946 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pdx1P52946 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pdx1P52946 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pdx1P52946 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Pdx1P52946 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.7■■□□□ 1.23
Pdx1P52946 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.7■■□□□ 1.22
Pdx1P52946 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pdx1P52946 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pdx1P52946 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pdx1P52946 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pdx1P52946 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pdx1P52946 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pdx1P52946 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pdx1P52946 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pdx1P52946 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.69■■□□□ 1.22
Pdx1P52946 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Pdx1P52946 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.69■■□□□ 1.22
Pdx1P52946 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pdx1P52946 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Pdx1P52946 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.68■■□□□ 1.22
Pdx1P52946 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.68■■□□□ 1.22
Pdx1P52946 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.68■■□□□ 1.22
Pdx1P52946 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pdx1P52946 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pdx1P52946 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pdx1P52946 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pdx1P52946 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pdx1P52946 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pdx1P52946 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.66■■□□□ 1.22
Pdx1P52946 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pdx1P52946 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pdx1P52946 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Pdx1P52946 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pdx1P52946 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pdx1P52946 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Pdx1P52946 Mir3960-201ENSMUST00000198213 73 ntBASIC22.65■■□□□ 1.22
Pdx1P52946 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Pdx1P52946 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pdx1P52946 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pdx1P52946 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Pdx1P52946 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pdx1P52946 Gm45364-201ENSMUST00000210883 159 ntBASIC22.64■■□□□ 1.21
Pdx1P52946 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pdx1P52946 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pdx1P52946 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pdx1P52946 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pdx1P52946 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pdx1P52946 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pdx1P52946 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pdx1P52946 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.62■■□□□ 1.21
Pdx1P52946 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdx1P52946 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdx1P52946 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.61■■□□□ 1.21
Pdx1P52946 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.61■■□□□ 1.21
Pdx1P52946 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.61■■□□□ 1.21
Pdx1P52946 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.61■■□□□ 1.21
Pdx1P52946 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Pdx1P52946 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Pdx1P52946 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pdx1P52946 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pdx1P52946 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.59■■□□□ 1.21
Pdx1P52946 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pdx1P52946 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pdx1P52946 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.58■■□□□ 1.21
Pdx1P52946 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pdx1P52946 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pdx1P52946 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.57■■□□□ 1.2
Pdx1P52946 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.57■■□□□ 1.2
Pdx1P52946 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.57■■□□□ 1.2
Pdx1P52946 Gm6311-201ENSMUST00000073790 878 ntBASIC22.56■■□□□ 1.2
Pdx1P52946 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pdx1P52946 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.55■■□□□ 1.2
Pdx1P52946 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Pdx1P52946 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pdx1P52946 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdx1P52946 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.54■■□□□ 1.2
Pdx1P52946 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pdx1P52946 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.54■■□□□ 1.2
Pdx1P52946 Gm9812-201ENSMUST00000061934 968 ntBASIC22.54■■□□□ 1.2
Pdx1P52946 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Pdx1P52946 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.53■■□□□ 1.2
Pdx1P52946 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pdx1P52946 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms