Protein–RNA interactions for Protein: P51612

Xpc, DNA repair protein complementing XP-C cells homolog, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XpcP51612 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
XpcP51612 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
XpcP51612 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC28.47■■■□□ 2.15
XpcP51612 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
XpcP51612 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.47■■■□□ 2.15
XpcP51612 Gm37136-201ENSMUST00000194368 194 ntBASIC28.46■■■□□ 2.15
XpcP51612 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
XpcP51612 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC28.45■■■□□ 2.14
XpcP51612 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
XpcP51612 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
XpcP51612 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
XpcP51612 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
XpcP51612 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
XpcP51612 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.44■■■□□ 2.14
XpcP51612 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
XpcP51612 Amer2-203ENSMUST00000225247 2662 ntBASIC28.43■■■□□ 2.14
XpcP51612 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
XpcP51612 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.42■■■□□ 2.14
XpcP51612 AC093043.1-201ENSMUST00000226700 898 ntBASIC28.42■■■□□ 2.14
XpcP51612 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
XpcP51612 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
XpcP51612 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
XpcP51612 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
XpcP51612 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
XpcP51612 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
XpcP51612 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
XpcP51612 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
XpcP51612 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
XpcP51612 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
XpcP51612 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
XpcP51612 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
XpcP51612 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
XpcP51612 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
XpcP51612 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
XpcP51612 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.35■■■□□ 2.13
XpcP51612 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
XpcP51612 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.35■■■□□ 2.13
XpcP51612 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
XpcP51612 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
XpcP51612 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
XpcP51612 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
XpcP51612 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
XpcP51612 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
XpcP51612 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.32■■■□□ 2.12
XpcP51612 Rps24-207ENSMUST00000224568 714 ntBASIC28.32■■■□□ 2.12
XpcP51612 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
XpcP51612 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
XpcP51612 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
XpcP51612 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC28.3■■■□□ 2.12
XpcP51612 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
XpcP51612 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.29■■■□□ 2.12
XpcP51612 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
XpcP51612 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC28.28■■■□□ 2.12
XpcP51612 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
XpcP51612 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
XpcP51612 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.26■■■□□ 2.11
XpcP51612 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
XpcP51612 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
XpcP51612 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
XpcP51612 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
XpcP51612 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
XpcP51612 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.25■■■□□ 2.11
XpcP51612 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
XpcP51612 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
XpcP51612 Gm15820-201ENSMUST00000201566 728 ntBASIC28.24■■■□□ 2.11
XpcP51612 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
XpcP51612 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC28.23■■■□□ 2.11
XpcP51612 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC28.23■■■□□ 2.11
XpcP51612 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
XpcP51612 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
XpcP51612 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
XpcP51612 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.22■■■□□ 2.11
XpcP51612 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.22■■■□□ 2.11
XpcP51612 Gm9812-201ENSMUST00000061934 968 ntBASIC28.22■■■□□ 2.11
XpcP51612 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
XpcP51612 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
XpcP51612 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
XpcP51612 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
XpcP51612 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
XpcP51612 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
XpcP51612 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
XpcP51612 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
XpcP51612 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC28.18■■■□□ 2.1
XpcP51612 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
XpcP51612 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.18■■■□□ 2.1
XpcP51612 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
XpcP51612 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
XpcP51612 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
XpcP51612 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
XpcP51612 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC28.16■■■□□ 2.1
XpcP51612 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
XpcP51612 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC28.16■■■□□ 2.1
XpcP51612 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
XpcP51612 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
XpcP51612 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
XpcP51612 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
XpcP51612 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.15■■■□□ 2.1
XpcP51612 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
XpcP51612 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
XpcP51612 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms