Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBE2AP49459 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBE2AP49459 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBE2AP49459 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
UBE2AP49459 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC15.77■□□□□ 0.12
UBE2AP49459 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
UBE2AP49459 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBE2AP49459 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
UBE2AP49459 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBE2AP49459 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
UBE2AP49459 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBE2AP49459 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBE2AP49459 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC15.76■□□□□ 0.11
UBE2AP49459 PROC-203ENST00000409048 1586 ntTSL 5 BASIC15.76■□□□□ 0.11
UBE2AP49459 AC100797.4-201ENST00000631653 1827 ntBASIC15.76■□□□□ 0.11
UBE2AP49459 AL162393.1-201ENST00000437852 946 ntBASIC15.76■□□□□ 0.11
UBE2AP49459 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBE2AP49459 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBE2AP49459 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC15.75■□□□□ 0.11
UBE2AP49459 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBE2AP49459 MEST-211ENST00000437945 1455 ntTSL 5 BASIC15.75■□□□□ 0.11
UBE2AP49459 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
UBE2AP49459 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBE2AP49459 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
UBE2AP49459 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
UBE2AP49459 AC087741.3-201ENST00000624270 1347 ntBASIC15.74■□□□□ 0.11
UBE2AP49459 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC15.74■□□□□ 0.11
UBE2AP49459 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBE2AP49459 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBE2AP49459 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBE2AP49459 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBE2AP49459 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC15.74■□□□□ 0.11
UBE2AP49459 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBE2AP49459 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBE2AP49459 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBE2AP49459 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBE2AP49459 BOD1-206ENST00000480951 814 ntTSL 2 BASIC15.73■□□□□ 0.11
UBE2AP49459 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBE2AP49459 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC15.73■□□□□ 0.11
UBE2AP49459 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBE2AP49459 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBE2AP49459 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBE2AP49459 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBE2AP49459 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBE2AP49459 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC15.72■□□□□ 0.11
UBE2AP49459 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBE2AP49459 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBE2AP49459 LINC00273-201ENST00000539813 1452 ntBASIC15.71■□□□□ 0.11
UBE2AP49459 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBE2AP49459 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBE2AP49459 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBE2AP49459 AC135983.2-203ENST00000454486 1613 ntBASIC15.71■□□□□ 0.11
UBE2AP49459 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC15.71■□□□□ 0.1
UBE2AP49459 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC15.71■□□□□ 0.1
UBE2AP49459 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2AP49459 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2AP49459 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2AP49459 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2AP49459 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
UBE2AP49459 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2AP49459 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
UBE2AP49459 BX255925.1-201ENST00000566954 1854 ntBASIC15.69■□□□□ 0.1
UBE2AP49459 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2AP49459 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2AP49459 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
UBE2AP49459 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
UBE2AP49459 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2AP49459 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2AP49459 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
UBE2AP49459 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBE2AP49459 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2AP49459 NRG1-221ENST00000614767 762 ntTSL 5 BASIC15.69■□□□□ 0.1
UBE2AP49459 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
UBE2AP49459 WHAMMP2-203ENST00000563942 1603 ntBASIC15.68■□□□□ 0.1
UBE2AP49459 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2AP49459 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2AP49459 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2AP49459 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2AP49459 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2AP49459 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2AP49459 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2AP49459 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
UBE2AP49459 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2AP49459 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2AP49459 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
UBE2AP49459 AP002414.2-202ENST00000590929 1450 ntBASIC15.67■□□□□ 0.1
UBE2AP49459 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2AP49459 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC15.67■□□□□ 0.1
UBE2AP49459 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2AP49459 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2AP49459 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2AP49459 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2AP49459 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2AP49459 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
UBE2AP49459 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2AP49459 CALM3-209ENST00000597743 577 ntTSL 4 BASIC15.66■□□□□ 0.1
UBE2AP49459 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
UBE2AP49459 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2AP49459 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2AP49459 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms