Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Xcl1P47993 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Xcl1P47993 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Xcl1P47993 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Xcl1P47993 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Xcl1P47993 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Xcl1P47993 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Xcl1P47993 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Xcl1P47993 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Xcl1P47993 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Xcl1P47993 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Xcl1P47993 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Xcl1P47993 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.12■□□□□ 0.01
Xcl1P47993 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Xcl1P47993 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Xcl1P47993 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Xcl1P47993 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Xcl1P47993 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Xcl1P47993 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Xcl1P47993 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.11■□□□□ 0.01
Xcl1P47993 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.11■□□□□ 0.01
Xcl1P47993 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Xcl1P47993 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Xcl1P47993 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Xcl1P47993 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.11■□□□□ 0.01
Xcl1P47993 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Xcl1P47993 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Xcl1P47993 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Xcl1P47993 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Xcl1P47993 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Xcl1P47993 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Xcl1P47993 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Xcl1P47993 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Xcl1P47993 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Xcl1P47993 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Xcl1P47993 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Xcl1P47993 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Xcl1P47993 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Xcl1P47993 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Xcl1P47993 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Xcl1P47993 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Xcl1P47993 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Xcl1P47993 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Xcl1P47993 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Xcl1P47993 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Xcl1P47993 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Xcl1P47993 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Xcl1P47993 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Xcl1P47993 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.06■□□□□ 0
Xcl1P47993 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.06■□□□□ 0
Xcl1P47993 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Xcl1P47993 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Xcl1P47993 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Xcl1P47993 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Xcl1P47993 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Xcl1P47993 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.05■□□□□ 0
Xcl1P47993 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Xcl1P47993 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Xcl1P47993 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Xcl1P47993 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Xcl1P47993 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Xcl1P47993 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Xcl1P47993 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Xcl1P47993 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Xcl1P47993 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Xcl1P47993 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Xcl1P47993 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Xcl1P47993 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Xcl1P47993 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Xcl1P47993 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Xcl1P47993 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Xcl1P47993 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Xcl1P47993 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Xcl1P47993 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Xcl1P47993 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.01□□□□□ -0.01
Xcl1P47993 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Xcl1P47993 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.01□□□□□ -0.01
Xcl1P47993 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Xcl1P47993 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Xcl1P47993 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Xcl1P47993 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Xcl1P47993 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC15□□□□□ -0.01
Xcl1P47993 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Xcl1P47993 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Xcl1P47993 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Xcl1P47993 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Xcl1P47993 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15□□□□□ -0.01
Xcl1P47993 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15□□□□□ -0.01
Xcl1P47993 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Xcl1P47993 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Xcl1P47993 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Xcl1P47993 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Xcl1P47993 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Xcl1P47993 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Xcl1P47993 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Xcl1P47993 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Xcl1P47993 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Xcl1P47993 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Xcl1P47993 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Xcl1P47993 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms