Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 TMEM248-207ENST00000607045 690 ntTSL 323.83■■□□□ 1.418e-7■■■■■ 32.6
MATR3P43243 TMEM248-204ENST00000424964 536 ntTSL 416.26■□□□□ 0.198e-7■■■■■ 32.6
MATR3P43243 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.058e-7■■■■■ 32.6
MATR3P43243 TMEM248-203ENST00000418375 545 ntTSL 414.6□□□□□ -0.078e-7■■■■■ 32.6
MATR3P43243 TMEM248-202ENST00000413593 637 ntTSL 411□□□□□ -0.658e-7■■■■■ 32.6
MATR3P43243 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.072e-6■■■■■ 32.6
MATR3P43243 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.643e-9■■■■■ 32.5
MATR3P43243 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.923e-9■■■■■ 32.5
MATR3P43243 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.99e-7■■■■■ 32.5
MATR3P43243 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.889e-7■■■■■ 32.5
MATR3P43243 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.379e-7■■■■■ 32.5
MATR3P43243 CCDC136-205ENST00000464672 1870 ntAPPRIS ALT2 TSL 213.61□□□□□ -0.239e-7■■■■■ 32.5
MATR3P43243 CCDC136-214ENST00000494552 3320 ntAPPRIS ALT2 TSL 1 (best)10.94□□□□□ -0.669e-7■■■■■ 32.5
MATR3P43243 CCDC136-201ENST00000297788 4169 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.669e-7■■■■■ 32.5
MATR3P43243 CCDC136-207ENST00000471729 495 ntTSL 310.03□□□□□ -0.89e-7■■■■■ 32.5
MATR3P43243 CCDC136-209ENST00000480137 3732 ntTSL 29.86□□□□□ -0.839e-7■■■■■ 32.5
MATR3P43243 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.332e-7■■■■■ 32.5
MATR3P43243 CLASP1-207ENST00000452274 3966 ntTSL 510.08□□□□□ -0.81e-8■■■■■ 32.5
MATR3P43243 CLASP1-212ENST00000480007 569 ntTSL 49.76□□□□□ -0.851e-8■■■■■ 32.5
MATR3P43243 CLASP1-211ENST00000474065 516 ntTSL 38.3□□□□□ -1.081e-8■■■■■ 32.5
MATR3P43243 CLASP1-204ENST00000418989 663 ntTSL 45.87□□□□□ -1.471e-8■■■■■ 32.5
MATR3P43243 CLASP1-206ENST00000449975 555 ntTSL 45.86□□□□□ -1.471e-8■■■■■ 32.5
MATR3P43243 AL161891.1-201ENST00000621575 4636 ntBASIC8.5□□□□□ -1.051e-7■■■■■ 32.5
MATR3P43243 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.131e-6■■■■■ 32.4
MATR3P43243 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.131e-6■■■■■ 32.4
MATR3P43243 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC9.65□□□□□ -0.861e-6■■■■■ 32.4
MATR3P43243 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.091e-6■■■■■ 32.4
MATR3P43243 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.171e-6■■■■■ 32.4
MATR3P43243 STK38L-212ENST00000545470 752 ntTSL 325.76■■□□□ 1.718e-7■■■■■ 32.4
MATR3P43243 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.068e-7■■■■■ 32.4
MATR3P43243 STK38L-207ENST00000541191 545 ntTSL 415.17■□□□□ 0.028e-7■■■■■ 32.4
MATR3P43243 STK38L-203ENST00000434385 757 ntTSL 312.14□□□□□ -0.478e-7■■■■■ 32.4
MATR3P43243 STK38L-210ENST00000544367 664 ntTSL 33.67□□□□□ -1.828e-7■■■■■ 32.4
MATR3P43243 STK38L-213ENST00000546286 477 ntTSL 53.44□□□□□ -1.868e-7■■■■■ 32.4
MATR3P43243 STK38L-205ENST00000539863 581 ntTSL 23.16□□□□□ -1.98e-7■■■■■ 32.4
MATR3P43243 STK38L-208ENST00000543246 548 ntTSL 43.16□□□□□ -1.98e-7■■■■■ 32.4
MATR3P43243 STK38L-206ENST00000540996 463 ntTSL 43.16□□□□□ -1.98e-7■■■■■ 32.4
MATR3P43243 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.77■■□□□ 1.564e-7■■■■■ 32.4
MATR3P43243 STRBP-203ENST00000407982 2751 ntTSL 1 (best)24.12■■□□□ 1.454e-7■■■■■ 32.4
MATR3P43243 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.044e-7■■■■■ 32.4
MATR3P43243 AC024581.1-201ENST00000514791 566 ntTSL 4 BASIC12.03□□□□□ -0.484e-17■■■■■ 32.4
MATR3P43243 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.224e-17■■■■■ 32.3
MATR3P43243 WDR33-205ENST00000436787 822 ntTSL 515.08■□□□□ 04e-17■■■■■ 32.3
MATR3P43243 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC11.9□□□□□ -0.54e-17■■■■■ 32.3
MATR3P43243 SLC13A5-207ENST00000572727 618 ntTSL 216.06■□□□□ 0.163e-17■■■■■ 32.3
MATR3P43243 CCDC162P-213ENST00000638844 2926 ntTSL 513.42□□□□□ -0.266e-8■■■■■ 32.3
MATR3P43243 CCDC162P-209ENST00000508210 518 ntTSL 312.04□□□□□ -0.486e-8■■■■■ 32.3
MATR3P43243 CCDC162P-202ENST00000368966 6751 ntBASIC9.58□□□□□ -0.886e-8■■■■■ 32.3
MATR3P43243 CCDC162P-208ENST00000506861 508 ntTSL 46.2□□□□□ -1.426e-8■■■■■ 32.3
MATR3P43243 AC093752.1-209ENST00000510844 541 ntTSL 34.91□□□□□ -1.621e-6■■■■■ 32.3
MATR3P43243 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.14■□□□□ 0.492e-6■■■■■ 32.2
MATR3P43243 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.125e-8■■■■■ 32.2
MATR3P43243 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.27■■□□□ 1.82e-6■■■■■ 32.2
MATR3P43243 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.61■■□□□ 1.692e-6■■■■■ 32.2
MATR3P43243 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.02■■□□□ 1.62e-6■■■■■ 32.2
MATR3P43243 TCEA1-210ENST00000522397 852 ntTSL 321.37■■□□□ 1.012e-6■■■■■ 32.2
MATR3P43243 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.95■□□□□ 0.782e-6■■■■■ 32.2
MATR3P43243 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.782e-6■■■■■ 32.2
MATR3P43243 TCEA1-207ENST00000521086 2966 ntTSL 1 (best)14.99□□□□□ -0.012e-6■■■■■ 32.2
MATR3P43243 SCMH1-215ENST00000488592 363 ntTSL 213.64□□□□□ -0.232e-8■■■■■ 32.2
MATR3P43243 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.32e-9■■■■■ 32.2
MATR3P43243 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.832e-9■■■■■ 32.2
MATR3P43243 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC9.37□□□□□ -0.912e-9■■■■■ 32.2
MATR3P43243 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC9.37□□□□□ -0.912e-9■■■■■ 32.2
MATR3P43243 BCAT1-209ENST00000546285 549 ntTSL 45.16□□□□□ -1.582e-9■■■■■ 32.2
MATR3P43243 ARHGAP17-210ENST00000572314 4966 ntTSL 210.29□□□□□ -0.761e-8■■■■■ 32.2
MATR3P43243 SMG7-205ENST00000440812 1190 ntTSL 522.82■■□□□ 1.244e-8■■■■■ 32.1
MATR3P43243 SMG7-203ENST00000367538 328 ntTSL 220.16■□□□□ 0.824e-8■■■■■ 32.1
MATR3P43243 SMG7-206ENST00000444547 580 ntTSL 419.35■□□□□ 0.694e-8■■■■■ 32.1
MATR3P43243 SMG7-204ENST00000419169 2483 ntAPPRIS ALT2 TSL 219.33■□□□□ 0.693e-7■■■■■ 32.1
MATR3P43243 SMG7-213ENST00000507691 760 ntTSL 518.61■□□□□ 0.574e-8■■■■■ 32.1
MATR3P43243 SMG7-210ENST00000502375 566 ntTSL 516.54■□□□□ 0.244e-8■■■■■ 32.1
MATR3P43243 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.083e-7■■■■■ 32.1
MATR3P43243 PAPSS1-208ENST00000514815 296 ntTSL 513.93□□□□□ -0.182e-7■■■■■ 32.1
MATR3P43243 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.293e-7■■■■■ 32.1
MATR3P43243 SMG7-201ENST00000347615 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.463e-7■■■■■ 32.1
MATR3P43243 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.543e-7■■■■■ 32.1
MATR3P43243 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.863e-7■■■■■ 32.1
MATR3P43243 SMG7-216ENST00000638826 219 ntTSL 2 BASIC9.09□□□□□ -0.954e-8■■■■■ 32.1
MATR3P43243 MIER3-201ENST00000336942 601 ntTSL 57.31□□□□□ -1.248e-9■■■■■ 32.1
MATR3P43243 MIER3-209ENST00000480115 394 ntTSL 55.72□□□□□ -1.498e-9■■■■■ 32.1
MATR3P43243 SMG7-208ENST00000493609 624 ntTSL 35.56□□□□□ -1.524e-8■■■■■ 32.1
MATR3P43243 MIER3-208ENST00000452157 5240 ntTSL 1 (best)4.1□□□□□ -1.758e-9■■■■■ 32.1
MATR3P43243 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.838e-9■■■■■ 32.1
MATR3P43243 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.998e-9■■■■■ 32.1
MATR3P43243 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.028e-9■■■■■ 32.1
MATR3P43243 ZNF516-205ENST00000617840 2326 ntTSL 1 (best)19.93■□□□□ 0.784e-7■■■■■ 32.1
MATR3P43243 ZNF516-203ENST00000542818 346 ntTSL 29.85□□□□□ -0.834e-7■■■■■ 32.1
MATR3P43243 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.224e-8■■■■■ 32.1
MATR3P43243 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.874e-8■■■■■ 32.1
MATR3P43243 BUD23-206ENST00000430270 1260 ntTSL 520.33■□□□□ 0.854e-8■■■■■ 32.1
MATR3P43243 BUD23-213ENST00000463307 1815 ntTSL 1 (best)16.14■□□□□ 0.174e-8■■■■■ 32.1
MATR3P43243 BUD23-209ENST00000436944 2496 ntTSL 215.95■□□□□ 0.144e-8■■■■■ 32.1
MATR3P43243 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.75□□□□□ -0.054e-8■■■■■ 32.1
MATR3P43243 BUD23-207ENST00000430446 738 ntTSL 314.1□□□□□ -0.154e-8■■■■■ 32.1
MATR3P43243 BUD23-212ENST00000453316 452 ntTSL 313.62□□□□□ -0.234e-8■■■■■ 32.1
MATR3P43243 BUD23-211ENST00000442099 691 ntTSL 313.36□□□□□ -0.274e-8■■■■■ 32.1
MATR3P43243 BUD23-215ENST00000471215 3886 ntTSL 211.03□□□□□ -0.644e-8■■■■■ 32.1
MATR3P43243 DBF4-202ENST00000413643 2694 ntTSL 1 (best)23.15■■□□□ 1.32e-7■■■■■ 32
MATR3P43243 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.292e-7■■■■■ 32
Retrieved 100 of 16,209 protein–RNA pairs in 413.7 ms