Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 PFS2YNL317W 1398 nt6.67□□□□□ -1.34
CUP9P41817 YML122CYML122C 381 nt6.66□□□□□ -1.34
CUP9P41817 YER152CYER152C 1332 nt6.66□□□□□ -1.34
CUP9P41817 PMT7YDR307W 1989 nt6.66□□□□□ -1.34
CUP9P41817 SKP1YDR328C 585 nt6.65□□□□□ -1.34
CUP9P41817 PUS4YNL292W 1212 nt6.65□□□□□ -1.34
CUP9P41817 YOR111WYOR111W 699 nt6.65□□□□□ -1.34
CUP9P41817 HSV2YGR223C 1347 nt6.65□□□□□ -1.35
CUP9P41817 RPL2AYFR031C-A 765 nt6.64□□□□□ -1.35
CUP9P41817 PAM17YKR065C 594 nt6.64□□□□□ -1.35
CUP9P41817 PEX28YHR150W 1740 nt6.64□□□□□ -1.35
CUP9P41817 MET13YGL125W 1803 nt6.64□□□□□ -1.35
CUP9P41817 YRF1-1YDR545W 5391 nt6.63□□□□□ -1.35
CUP9P41817 YRF1-5YLR467W 5391 nt6.63□□□□□ -1.35
CUP9P41817 YRF1-8YOR396W 5391 nt6.63□□□□□ -1.35
CUP9P41817 RTG2YGL252C 1767 nt6.63□□□□□ -1.35
CUP9P41817 PET10YKR046C 852 nt6.63□□□□□ -1.35
CUP9P41817 ZIM17YNL310C 525 nt6.63□□□□□ -1.35
CUP9P41817 LGE1YPL055C 999 nt6.63□□□□□ -1.35
CUP9P41817 YPC1YBR183W 951 nt6.63□□□□□ -1.35
CUP9P41817 DML1YMR211W 1428 nt6.62□□□□□ -1.35
CUP9P41817 OPI1YHL020C 1215 nt6.62□□□□□ -1.35
CUP9P41817 YJL213WYJL213W 996 nt6.62□□□□□ -1.35
CUP9P41817 DAL80YKR034W 810 nt6.62□□□□□ -1.35
CUP9P41817 SPE3YPR069C 882 nt6.62□□□□□ -1.35
CUP9P41817 YDR215CYDR215C 414 nt6.61□□□□□ -1.35
CUP9P41817 YPQ2YDR352W 954 nt6.61□□□□□ -1.35
CUP9P41817 PMT1YDL095W 2454 nt6.61□□□□□ -1.35
CUP9P41817 BDS1YOL164W 1941 nt6.6□□□□□ -1.35
CUP9P41817 PLB3YOL011W 2061 nt6.59□□□□□ -1.35
CUP9P41817 TPO1YLL028W 1761 nt6.58□□□□□ -1.36
CUP9P41817 NFS1YCL017C 1494 nt6.58□□□□□ -1.36
CUP9P41817 GCD11YER025W 1584 nt6.57□□□□□ -1.36
CUP9P41817 YEL034C-AYEL034C-A 603 nt6.57□□□□□ -1.36
CUP9P41817 CCW12YLR110C 402 nt6.57□□□□□ -1.36
CUP9P41817 SML1YML058W 315 nt6.57□□□□□ -1.36
CUP9P41817 NAF1YNL124W 1479 nt6.57□□□□□ -1.36
CUP9P41817 DCR2YLR361C 1737 nt6.56□□□□□ -1.36
CUP9P41817 TUB1YML085C 1344 nt6.56□□□□□ -1.36
CUP9P41817 CKB1YGL019W 837 nt6.56□□□□□ -1.36
CUP9P41817 CAR2YLR438W 1275 nt6.56□□□□□ -1.36
CUP9P41817 ERV25YML012W 636 nt6.56□□□□□ -1.36
CUP9P41817 snR30snR30 606 nt6.56□□□□□ -1.36
CUP9P41817 CIT2YCR005C 1383 nt6.56□□□□□ -1.36
CUP9P41817 ERG10YPL028W 1197 nt6.55□□□□□ -1.36
CUP9P41817 MET30YIL046W 1923 nt6.54□□□□□ -1.36
CUP9P41817 AVL9YLR114C 2295 nt6.54□□□□□ -1.36
CUP9P41817 SRY1YKL218C 981 nt6.54□□□□□ -1.36
CUP9P41817 SNF7YLR025W 723 nt6.54□□□□□ -1.36
CUP9P41817 SGF73YGL066W 1974 nt6.54□□□□□ -1.36
CUP9P41817 MPH3YJR160C 1809 nt6.54□□□□□ -1.36
CUP9P41817 GNP1YDR508C 1992 nt6.53□□□□□ -1.36
CUP9P41817 PDA1YER178W 1263 nt6.53□□□□□ -1.36
CUP9P41817 YLR162WYLR162W 357 nt6.53□□□□□ -1.36
CUP9P41817 PDC5YLR134W 1692 nt6.52□□□□□ -1.37
CUP9P41817 BIO3YNR058W 1443 nt6.52□□□□□ -1.37
CUP9P41817 RTC4YNL254C 1206 nt6.51□□□□□ -1.37
CUP9P41817 RSC9YML127W 1746 nt6.5□□□□□ -1.37
CUP9P41817 ADE5,7YGL234W 2409 nt6.5□□□□□ -1.37
CUP9P41817 VPS65YLR322W 315 nt6.5□□□□□ -1.37
CUP9P41817 LDB7YBL006C 543 nt6.5□□□□□ -1.37
CUP9P41817 MPE1YKL059C 1326 nt6.5□□□□□ -1.37
CUP9P41817 SNU66YOR308C 1764 nt6.49□□□□□ -1.37
CUP9P41817 RCF2YNR018W 675 nt6.49□□□□□ -1.37
CUP9P41817 ADE2YOR128C 1716 nt6.49□□□□□ -1.37
CUP9P41817 MAS1YLR163C 1389 nt6.48□□□□□ -1.37
CUP9P41817 YNL190WYNL190W 615 nt6.48□□□□□ -1.37
CUP9P41817 GET4YOR164C 939 nt6.48□□□□□ -1.37
CUP9P41817 YAH1YPL252C 519 nt6.48□□□□□ -1.37
CUP9P41817 YPR130CYPR130C 408 nt6.48□□□□□ -1.37
CUP9P41817 DPM1YPR183W 804 nt6.48□□□□□ -1.37
CUP9P41817 YCL049CYCL049C 939 nt6.48□□□□□ -1.37
CUP9P41817 ERG24YNL280C 1317 nt6.48□□□□□ -1.37
CUP9P41817 RUP1YOR138C 2016 nt6.47□□□□□ -1.37
CUP9P41817 LEO1YOR123C 1395 nt6.47□□□□□ -1.37
CUP9P41817 CYS4YGR155W 1524 nt6.47□□□□□ -1.37
CUP9P41817 ECM10YEL030W 1935 nt6.47□□□□□ -1.37
CUP9P41817 PET117YER058W 324 nt6.47□□□□□ -1.37
CUP9P41817 RTC2YBR147W 891 nt6.47□□□□□ -1.37
CUP9P41817 HXT9YJL219W 1704 nt6.47□□□□□ -1.37
CUP9P41817 AIM34YMR003W 597 nt6.46□□□□□ -1.38
CUP9P41817 PRC1YMR297W 1599 nt6.46□□□□□ -1.38
CUP9P41817 YPL264CYPL264C 1062 nt6.46□□□□□ -1.38
CUP9P41817 COX15YER141W 1461 nt6.46□□□□□ -1.38
CUP9P41817 ERR3YMR323W 1314 nt6.46□□□□□ -1.38
CUP9P41817 MAM3YOL060C 2121 nt6.46□□□□□ -1.38
CUP9P41817 YJL163CYJL163C 1668 nt6.45□□□□□ -1.38
CUP9P41817 CIA1YDR267C 993 nt6.45□□□□□ -1.38
CUP9P41817 SNA3YJL151C 402 nt6.45□□□□□ -1.38
CUP9P41817 FCY22YER060W-A 1593 nt6.44□□□□□ -1.38
CUP9P41817 ITR1YDR497C 1755 nt6.44□□□□□ -1.38
CUP9P41817 POR2YIL114C 846 nt6.44□□□□□ -1.38
CUP9P41817 YOL046CYOL046C 675 nt6.44□□□□□ -1.38
CUP9P41817 YNR001W-AYNR001W-A 219 nt6.43□□□□□ -1.38
CUP9P41817 HTZ1YOL012C 405 nt6.43□□□□□ -1.38
CUP9P41817 LIA1YJR070C 978 nt6.42□□□□□ -1.38
CUP9P41817 HOC1YJR075W 1191 nt6.42□□□□□ -1.38
CUP9P41817 YPR076WYPR076W 375 nt6.42□□□□□ -1.38
CUP9P41817 BEM1YBR200W 1656 nt6.42□□□□□ -1.38
CUP9P41817 PLB2YMR006C 2121 nt6.41□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 33.6 ms