Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Abca1P41233 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Abca1P41233 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Abca1P41233 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.97■□□□□ 0.63
Abca1P41233 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Abca1P41233 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.96■□□□□ 0.63
Abca1P41233 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Abca1P41233 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Abca1P41233 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Abca1P41233 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.95■□□□□ 0.62
Abca1P41233 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Abca1P41233 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Abca1P41233 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abca1P41233 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Abca1P41233 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abca1P41233 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abca1P41233 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Abca1P41233 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abca1P41233 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.94■□□□□ 0.62
Abca1P41233 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abca1P41233 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Abca1P41233 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Abca1P41233 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.93■□□□□ 0.62
Abca1P41233 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Abca1P41233 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abca1P41233 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abca1P41233 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abca1P41233 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Abca1P41233 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.92■□□□□ 0.62
Abca1P41233 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.92■□□□□ 0.62
Abca1P41233 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abca1P41233 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abca1P41233 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.91■□□□□ 0.62
Abca1P41233 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abca1P41233 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abca1P41233 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Abca1P41233 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.9■□□□□ 0.62
Abca1P41233 Gm15546-201ENSMUST00000122095 826 ntBASIC18.9■□□□□ 0.62
Abca1P41233 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Abca1P41233 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abca1P41233 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Abca1P41233 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Abca1P41233 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.89■□□□□ 0.61
Abca1P41233 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.89■□□□□ 0.61
Abca1P41233 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.88■□□□□ 0.61
Abca1P41233 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abca1P41233 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abca1P41233 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Abca1P41233 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Abca1P41233 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abca1P41233 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Abca1P41233 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abca1P41233 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abca1P41233 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abca1P41233 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca1P41233 Gm9812-201ENSMUST00000061934 968 ntBASIC18.85■□□□□ 0.61
Abca1P41233 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca1P41233 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca1P41233 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca1P41233 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca1P41233 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Abca1P41233 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca1P41233 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abca1P41233 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Abca1P41233 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.84■□□□□ 0.61
Abca1P41233 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Abca1P41233 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Abca1P41233 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Abca1P41233 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Abca1P41233 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abca1P41233 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abca1P41233 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abca1P41233 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Abca1P41233 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.82■□□□□ 0.6
Abca1P41233 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Abca1P41233 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Abca1P41233 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.81■□□□□ 0.6
Abca1P41233 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abca1P41233 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.8■□□□□ 0.6
Abca1P41233 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Abca1P41233 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abca1P41233 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abca1P41233 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abca1P41233 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abca1P41233 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Abca1P41233 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abca1P41233 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Abca1P41233 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.78■□□□□ 0.6
Abca1P41233 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Abca1P41233 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Abca1P41233 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abca1P41233 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abca1P41233 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Abca1P41233 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abca1P41233 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Abca1P41233 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Abca1P41233 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abca1P41233 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abca1P41233 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Abca1P41233 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms