Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 FHN1YGR131W 525 nt8.8□□□□□ -1
MSH4P40965 YGR137WYGR137W 375 nt8.8□□□□□ -1
MSH4P40965 YAL019W-AYAL019W-A 570 nt8.8□□□□□ -1
MSH4P40965 TDA4YJR116W 840 nt8.8□□□□□ -1
MSH4P40965 URA1YKL216W 945 nt8.8□□□□□ -1
MSH4P40965 UTP6YDR449C 1323 nt8.8□□□□□ -1
MSH4P40965 ARG7YMR062C 1326 nt8.8□□□□□ -1
MSH4P40965 RMA1YKL132C 1293 nt8.79□□□□□ -1
MSH4P40965 ALG7YBR243C 1347 nt8.79□□□□□ -1
MSH4P40965 GLY1YEL046C 1164 nt8.78□□□□□ -1
MSH4P40965 ATO2YNR002C 849 nt8.78□□□□□ -1
MSH4P40965 PMT7YDR307W 1989 nt8.77□□□□□ -1
MSH4P40965 YNL040WYNL040W 1371 nt8.77□□□□□ -1.01
MSH4P40965 TGL5YOR081C 2250 nt8.77□□□□□ -1.01
MSH4P40965 ARO3YDR035W 1113 nt8.77□□□□□ -1.01
MSH4P40965 SPE4YLR146C 903 nt8.77□□□□□ -1.01
MSH4P40965 LAT1YNL071W 1449 nt8.77□□□□□ -1.01
MSH4P40965 HXT13YEL069C 1695 nt8.76□□□□□ -1.01
MSH4P40965 MRN1YPL184C 1839 nt8.76□□□□□ -1.01
MSH4P40965 YPL071CYPL071C 471 nt8.76□□□□□ -1.01
MSH4P40965 YBL111CYBL111C 2004 nt8.76□□□□□ -1.01
MSH4P40965 ERR3YMR323W 1314 nt8.76□□□□□ -1.01
MSH4P40965 ERR1YOR393W 1314 nt8.76□□□□□ -1.01
MSH4P40965 ERR2YPL281C 1314 nt8.76□□□□□ -1.01
MSH4P40965 HDA1YNL021W 2121 nt8.75□□□□□ -1.01
MSH4P40965 WSC4YHL028W 1818 nt8.75□□□□□ -1.01
MSH4P40965 PIH1YHR034C 1035 nt8.75□□□□□ -1.01
MSH4P40965 YMR253CYMR253C 1245 nt8.75□□□□□ -1.01
MSH4P40965 ATP23YNR020C 813 nt8.75□□□□□ -1.01
MSH4P40965 YKR023WYKR023W 1593 nt8.73□□□□□ -1.01
MSH4P40965 MAS2YHR024C 1449 nt8.73□□□□□ -1.01
MSH4P40965 INM1YHR046C 888 nt8.73□□□□□ -1.01
MSH4P40965 YOX1YML027W 1158 nt8.73□□□□□ -1.01
MSH4P40965 MSB3YNL293W 1902 nt8.73□□□□□ -1.01
MSH4P40965 TIF3YPR163C 1311 nt8.73□□□□□ -1.01
MSH4P40965 YIL177CYIL177C 5277 nt8.72□□□□□ -1.01
MSH4P40965 SEM1YDR363W-A 270 nt8.72□□□□□ -1.01
MSH4P40965 MRP7YNL005C 1116 nt8.72□□□□□ -1.01
MSH4P40965 YNL140CYNL140C 570 nt8.72□□□□□ -1.01
MSH4P40965 MNN9YPL050C 1188 nt8.72□□□□□ -1.01
MSH4P40965 SNP1YIL061C 903 nt8.71□□□□□ -1.02
MSH4P40965 STS1YIR011C 960 nt8.7□□□□□ -1.02
MSH4P40965 YDR509WYDR509W 348 nt8.69□□□□□ -1.02
MSH4P40965 DOC1YGL240W 753 nt8.69□□□□□ -1.02
MSH4P40965 ERV2YPR037C 591 nt8.69□□□□□ -1.02
MSH4P40965 CRN1YLR429W 1956 nt8.68□□□□□ -1.02
MSH4P40965 AQR1YNL065W 1761 nt8.68□□□□□ -1.02
MSH4P40965 MET13YGL125W 1803 nt8.67□□□□□ -1.02
MSH4P40965 TES1YJR019C 1050 nt8.67□□□□□ -1.02
MSH4P40965 YJR142WYJR142W 1029 nt8.67□□□□□ -1.02
MSH4P40965 YGL081WYGL081W 963 nt8.66□□□□□ -1.02
MSH4P40965 Q0144Q0144 330 nt8.66□□□□□ -1.02
MSH4P40965 YPL264CYPL264C 1062 nt8.66□□□□□ -1.02
MSH4P40965 CPR2YHR057C 618 nt8.65□□□□□ -1.02
MSH4P40965 MSI1YBR195C 1269 nt8.65□□□□□ -1.02
MSH4P40965 BNS1YGR230W 414 nt8.64□□□□□ -1.03
MSH4P40965 CKI1YLR133W 1749 nt8.63□□□□□ -1.03
MSH4P40965 DST1YGL043W 930 nt8.63□□□□□ -1.03
MSH4P40965 NMA2YGR010W 1188 nt8.63□□□□□ -1.03
MSH4P40965 AIM46YHR199C 933 nt8.63□□□□□ -1.03
MSH4P40965 YML034C-AYML034C-A 399 nt8.63□□□□□ -1.03
MSH4P40965 UME1YPL139C 1383 nt8.62□□□□□ -1.03
MSH4P40965 KTR4YBR199W 1395 nt8.62□□□□□ -1.03
MSH4P40965 ECM27YJR106W 2178 nt8.62□□□□□ -1.03
MSH4P40965 TRR2YHR106W 1029 nt8.62□□□□□ -1.03
MSH4P40965 PTH2YBL057C 627 nt8.62□□□□□ -1.03
MSH4P40965 ELP6YMR312W 822 nt8.62□□□□□ -1.03
MSH4P40965 OSM1YJR051W 1506 nt8.62□□□□□ -1.03
MSH4P40965 MTC6YHR151C 1581 nt8.61□□□□□ -1.03
MSH4P40965 PSA1YDL055C 1086 nt8.61□□□□□ -1.03
MSH4P40965 PMT1YDL095W 2454 nt8.6□□□□□ -1.03
MSH4P40965 CDC13YDL220C 2775 nt8.6□□□□□ -1.03
MSH4P40965 YPL277CYPL277C 1464 nt8.6□□□□□ -1.03
MSH4P40965 RRP43YCR035C 1185 nt8.6□□□□□ -1.03
MSH4P40965 ATG17YLR423C 1254 nt8.6□□□□□ -1.03
MSH4P40965 FCP1YMR277W 2199 nt8.6□□□□□ -1.03
MSH4P40965 STE3YKL178C 1413 nt8.6□□□□□ -1.03
MSH4P40965 YJL045WYJL045W 1905 nt8.6□□□□□ -1.03
MSH4P40965 YER152CYER152C 1332 nt8.59□□□□□ -1.03
MSH4P40965 CYS3YAL012W 1185 nt8.59□□□□□ -1.03
MSH4P40965 YJL144WYJL144W 315 nt8.59□□□□□ -1.03
MSH4P40965 REC114YMR133W 1287 nt8.59□□□□□ -1.03
MSH4P40965 INP54YOL065C 1155 nt8.59□□□□□ -1.03
MSH4P40965 CDC3YLR314C 1563 nt8.59□□□□□ -1.03
MSH4P40965 RPL2AYFR031C-A 765 nt8.58□□□□□ -1.04
MSH4P40965 SKG1YKR100C 1068 nt8.58□□□□□ -1.04
MSH4P40965 YNL165WYNL165W 1221 nt8.58□□□□□ -1.04
MSH4P40965 POB3YML069W 1659 nt8.58□□□□□ -1.04
MSH4P40965 YNL295WYNL295W 1575 nt8.57□□□□□ -1.04
MSH4P40965 PRS4YBL068W 981 nt8.57□□□□□ -1.04
MSH4P40965 YPQ1YOL092W 927 nt8.57□□□□□ -1.04
MSH4P40965 CST26YBR042C 1194 nt8.57□□□□□ -1.04
MSH4P40965 AOS1YPR180W 1044 nt8.57□□□□□ -1.04
MSH4P40965 SGF73YGL066W 1974 nt8.56□□□□□ -1.04
MSH4P40965 YOR111WYOR111W 699 nt8.56□□□□□ -1.04
MSH4P40965 MCP1YOR228C 909 nt8.56□□□□□ -1.04
MSH4P40965 PET20YPL159C 762 nt8.56□□□□□ -1.04
MSH4P40965 TPO1YLL028W 1761 nt8.56□□□□□ -1.04
MSH4P40965 HXT9YJL219W 1704 nt8.55□□□□□ -1.04
MSH4P40965 MAK32YCR019W 1092 nt8.55□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 140.1 ms