Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 tA(AGC)DtA(AGC)D 73 nt7.79□□□□□ -1.16
VPS41P38959 tA(AGC)FtA(AGC)F 73 nt7.79□□□□□ -1.16
VPS41P38959 tA(AGC)GtA(AGC)G 73 nt7.79□□□□□ -1.16
VPS41P38959 tA(AGC)HtA(AGC)H 73 nt7.79□□□□□ -1.16
VPS41P38959 tA(AGC)JtA(AGC)J 73 nt7.79□□□□□ -1.16
VPS41P38959 tA(AGC)K1tA(AGC)K1 73 nt7.79□□□□□ -1.16
VPS41P38959 tA(AGC)K2tA(AGC)K2 73 nt7.79□□□□□ -1.16
VPS41P38959 tA(AGC)LtA(AGC)L 73 nt7.79□□□□□ -1.16
VPS41P38959 tA(AGC)M1tA(AGC)M1 73 nt7.79□□□□□ -1.16
VPS41P38959 tA(AGC)M2tA(AGC)M2 73 nt7.79□□□□□ -1.16
VPS41P38959 tA(AGC)PtA(AGC)P 73 nt7.79□□□□□ -1.16
VPS41P38959 FLX1YIL134W 936 nt7.79□□□□□ -1.16
VPS41P38959 DAL80YKR034W 810 nt7.78□□□□□ -1.16
VPS41P38959 NAP1YKR048C 1254 nt7.78□□□□□ -1.16
VPS41P38959 YEN1YER041W 2280 nt7.78□□□□□ -1.16
VPS41P38959 YGR139WYGR139W 339 nt7.77□□□□□ -1.17
VPS41P38959 CPR2YHR057C 618 nt7.77□□□□□ -1.17
VPS41P38959 RRN10YBL025W 438 nt7.77□□□□□ -1.17
VPS41P38959 BXI1YNL305C 894 nt7.77□□□□□ -1.17
VPS41P38959 AFG3YER017C 2286 nt7.77□□□□□ -1.17
VPS41P38959 DAL7YIR031C 1665 nt7.76□□□□□ -1.17
VPS41P38959 JHD1YER051W 1479 nt7.76□□□□□ -1.17
VPS41P38959 YJR154WYJR154W 1041 nt7.76□□□□□ -1.17
VPS41P38959 IPL1YPL209C 1104 nt7.76□□□□□ -1.17
VPS41P38959 SMK1YPR054W 1167 nt7.76□□□□□ -1.17
VPS41P38959 AGP2YBR132C 1791 nt7.76□□□□□ -1.17
VPS41P38959 ACO1YLR304C 2337 nt7.75□□□□□ -1.17
VPS41P38959 YCR061WYCR061W 1896 nt7.75□□□□□ -1.17
VPS41P38959 NTG1YAL015C 1200 nt7.74□□□□□ -1.17
VPS41P38959 SRP102YKL154W 735 nt7.74□□□□□ -1.17
VPS41P38959 CYB2YML054C 1776 nt7.74□□□□□ -1.17
VPS41P38959 RSP5YER125W 2430 nt7.73□□□□□ -1.17
VPS41P38959 CIR2YOR356W 1896 nt7.73□□□□□ -1.17
VPS41P38959 YPT31YER031C 672 nt7.73□□□□□ -1.17
VPS41P38959 CYC3YAL039C 810 nt7.73□□□□□ -1.17
VPS41P38959 YMR166CYMR166C 1107 nt7.73□□□□□ -1.17
VPS41P38959 ADH6YMR318C 1083 nt7.73□□□□□ -1.17
VPS41P38959 MET8YBR213W 825 nt7.72□□□□□ -1.17
VPS41P38959 SKY1YMR216C 2229 nt7.72□□□□□ -1.17
VPS41P38959 ERO1YML130C 1692 nt7.72□□□□□ -1.17
VPS41P38959 MLS1YNL117W 1665 nt7.72□□□□□ -1.17
VPS41P38959 GPH1YPR160W 2709 nt7.72□□□□□ -1.17
VPS41P38959 VTS1YOR359W 1572 nt7.71□□□□□ -1.17
VPS41P38959 HAL5YJL165C 2568 nt7.7□□□□□ -1.18
VPS41P38959 MCH2YKL221W 1422 nt7.69□□□□□ -1.18
VPS41P38959 GSH1YJL101C 2037 nt7.69□□□□□ -1.18
VPS41P38959 ARC35YNR035C 1029 nt7.69□□□□□ -1.18
VPS41P38959 YLL066CYLL066C 3618 nt7.69□□□□□ -1.18
VPS41P38959 YCR025CYCR025C 411 nt7.68□□□□□ -1.18
VPS41P38959 ERG24YNL280C 1317 nt7.68□□□□□ -1.18
VPS41P38959 ECM30YLR436C 3825 nt7.68□□□□□ -1.18
VPS41P38959 OPI1YHL020C 1215 nt7.67□□□□□ -1.18
VPS41P38959 SEN2YLR105C 1134 nt7.67□□□□□ -1.18
VPS41P38959 YJL064WYJL064W 396 nt7.66□□□□□ -1.18
VPS41P38959 ERG12YMR208W 1332 nt7.66□□□□□ -1.18
VPS41P38959 MTR3YGR158C 753 nt7.65□□□□□ -1.18
VPS41P38959 RPL2BYIL018W 765 nt7.65□□□□□ -1.18
VPS41P38959 RRT14YIL127C 621 nt7.65□□□□□ -1.18
VPS41P38959 DPH5YLR172C 903 nt7.65□□□□□ -1.18
VPS41P38959 CLN1YMR199W 1641 nt7.65□□□□□ -1.18
VPS41P38959 SNT309YPR101W 528 nt7.65□□□□□ -1.18
VPS41P38959 EMP65YER140W 1671 nt7.64□□□□□ -1.19
VPS41P38959 STE3YKL178C 1413 nt7.64□□□□□ -1.19
VPS41P38959 ERS1YCR075C 783 nt7.64□□□□□ -1.19
VPS41P38959 YML034C-AYML034C-A 399 nt7.64□□□□□ -1.19
VPS41P38959 BDS1YOL164W 1941 nt7.64□□□□□ -1.19
VPS41P38959 CCT3YJL014W 1605 nt7.63□□□□□ -1.19
VPS41P38959 GRH1YDR517W 1119 nt7.63□□□□□ -1.19
VPS41P38959 SER2YGR208W 930 nt7.63□□□□□ -1.19
VPS41P38959 PMU1YKL128C 888 nt7.63□□□□□ -1.19
VPS41P38959 LSP1YPL004C 1026 nt7.63□□□□□ -1.19
VPS41P38959 RDR1YOR380W 1641 nt7.63□□□□□ -1.19
VPS41P38959 ECM38YLR299W 1983 nt7.62□□□□□ -1.19
VPS41P38959 TAH11YJR046W 1815 nt7.62□□□□□ -1.19
VPS41P38959 PAU19YMR325W 375 nt7.62□□□□□ -1.19
VPS41P38959 YNL295WYNL295W 1575 nt7.62□□□□□ -1.19
VPS41P38959 AMN1YBR158W 1650 nt7.6□□□□□ -1.19
VPS41P38959 YGR210CYGR210C 1236 nt7.6□□□□□ -1.19
VPS41P38959 SUN4YNL066W 1263 nt7.6□□□□□ -1.19
VPS41P38959 ASN2YGR124W 1719 nt7.6□□□□□ -1.19
VPS41P38959 HTS1YPR033C 1641 nt7.6□□□□□ -1.19
VPS41P38959 NMD5YJR132W 3147 nt7.59□□□□□ -1.19
VPS41P38959 CDC7YDL017W 1524 nt7.59□□□□□ -1.19
VPS41P38959 YAL045CYAL045C 309 nt7.59□□□□□ -1.19
VPS41P38959 PHO85YPL031C 918 nt7.59□□□□□ -1.19
VPS41P38959 BDF2YDL070W 1917 nt7.58□□□□□ -1.2
VPS41P38959 CEM1YER061C 1329 nt7.58□□□□□ -1.2
VPS41P38959 YBR241CYBR241C 1467 nt7.58□□□□□ -1.2
VPS41P38959 TGA1tA(UGC)A 73 nt7.58□□□□□ -1.2
VPS41P38959 tA(UGC)EtA(UGC)E 73 nt7.58□□□□□ -1.2
VPS41P38959 tA(UGC)GtA(UGC)G 73 nt7.58□□□□□ -1.2
VPS41P38959 tA(UGC)LtA(UGC)L 73 nt7.58□□□□□ -1.2
VPS41P38959 tA(UGC)OtA(UGC)O 73 nt7.58□□□□□ -1.2
VPS41P38959 OPI11YPR044C 354 nt7.58□□□□□ -1.2
VPS41P38959 YOS9YDR057W 1629 nt7.58□□□□□ -1.2
VPS41P38959 CTF8YHR191C 402 nt7.57□□□□□ -1.2
VPS41P38959 BIM1YER016W 1035 nt7.56□□□□□ -1.2
VPS41P38959 HSP12YFL014W 330 nt7.56□□□□□ -1.2
VPS41P38959 RPS6AYPL090C 711 nt7.56□□□□□ -1.2
VPS41P38959 RPS6BYBR181C 711 nt7.56□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms