Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 YPT31YER031C 672 nt5.89□□□□□ -1.47
RPB11P38902 DAL7YIR031C 1665 nt5.88□□□□□ -1.47
RPB11P38902 tA(AGC)DtA(AGC)D 73 nt5.88□□□□□ -1.47
RPB11P38902 tA(AGC)FtA(AGC)F 73 nt5.88□□□□□ -1.47
RPB11P38902 tA(AGC)GtA(AGC)G 73 nt5.88□□□□□ -1.47
RPB11P38902 tA(AGC)HtA(AGC)H 73 nt5.88□□□□□ -1.47
RPB11P38902 tA(AGC)JtA(AGC)J 73 nt5.88□□□□□ -1.47
RPB11P38902 tA(AGC)K1tA(AGC)K1 73 nt5.88□□□□□ -1.47
RPB11P38902 tA(AGC)K2tA(AGC)K2 73 nt5.88□□□□□ -1.47
RPB11P38902 tA(AGC)LtA(AGC)L 73 nt5.88□□□□□ -1.47
RPB11P38902 tA(AGC)M1tA(AGC)M1 73 nt5.88□□□□□ -1.47
RPB11P38902 tA(AGC)M2tA(AGC)M2 73 nt5.88□□□□□ -1.47
RPB11P38902 tA(AGC)PtA(AGC)P 73 nt5.88□□□□□ -1.47
RPB11P38902 DST1YGL043W 930 nt5.88□□□□□ -1.47
RPB11P38902 NAP1YKR048C 1254 nt5.88□□□□□ -1.47
RPB11P38902 ARC35YNR035C 1029 nt5.88□□□□□ -1.47
RPB11P38902 MTR3YGR158C 753 nt5.87□□□□□ -1.47
RPB11P38902 RRT14YIL127C 621 nt5.87□□□□□ -1.47
RPB11P38902 NTG1YAL015C 1200 nt5.87□□□□□ -1.47
RPB11P38902 PMU1YKL128C 888 nt5.87□□□□□ -1.47
RPB11P38902 ERV25YML012W 636 nt5.87□□□□□ -1.47
RPB11P38902 IPL1YPL209C 1104 nt5.87□□□□□ -1.47
RPB11P38902 YLR349WYLR349W 507 nt5.86□□□□□ -1.47
RPB11P38902 YPC1YBR183W 951 nt5.86□□□□□ -1.47
RPB11P38902 YOS9YDR057W 1629 nt5.85□□□□□ -1.47
RPB11P38902 HSM3YBR272C 1443 nt5.85□□□□□ -1.47
RPB11P38902 MHP1YJL042W 4197 nt5.85□□□□□ -1.47
RPB11P38902 SKY1YMR216C 2229 nt5.85□□□□□ -1.47
RPB11P38902 NUP84YDL116W 2181 nt5.85□□□□□ -1.47
RPB11P38902 PAU5YFL020C 369 nt5.85□□□□□ -1.47
RPB11P38902 YIP4YGL198W 708 nt5.85□□□□□ -1.47
RPB11P38902 CPR2YHR057C 618 nt5.85□□□□□ -1.47
RPB11P38902 STP3YLR375W 1032 nt5.85□□□□□ -1.47
RPB11P38902 JHD1YER051W 1479 nt5.84□□□□□ -1.47
RPB11P38902 HMS2YJR147W 1077 nt5.84□□□□□ -1.47
RPB11P38902 EXG2YDR261C 1689 nt5.84□□□□□ -1.47
RPB11P38902 RSP5YER125W 2430 nt5.84□□□□□ -1.48
RPB11P38902 ADE17YMR120C 1779 nt5.83□□□□□ -1.48
RPB11P38902 ASN2YGR124W 1719 nt5.83□□□□□ -1.48
RPB11P38902 RPL2BYIL018W 765 nt5.83□□□□□ -1.48
RPB11P38902 SNT309YPR101W 528 nt5.83□□□□□ -1.48
RPB11P38902 AFG3YER017C 2286 nt5.83□□□□□ -1.48
RPB11P38902 TAH11YJR046W 1815 nt5.83□□□□□ -1.48
RPB11P38902 ARP3YJR065C 1350 nt5.82□□□□□ -1.48
RPB11P38902 PGC1YPL206C 966 nt5.82□□□□□ -1.48
RPB11P38902 OPI11YPR044C 354 nt5.82□□□□□ -1.48
RPB11P38902 TOS2YGR221C 1869 nt5.81□□□□□ -1.48
RPB11P38902 FPR2YDR519W 408 nt5.81□□□□□ -1.48
RPB11P38902 CTF8YHR191C 402 nt5.81□□□□□ -1.48
RPB11P38902 TPK1YJL164C 1194 nt5.81□□□□□ -1.48
RPB11P38902 DAL80YKR034W 810 nt5.81□□□□□ -1.48
RPB11P38902 LSP1YPL004C 1026 nt5.81□□□□□ -1.48
RPB11P38902 PRP2YNR011C 2631 nt5.81□□□□□ -1.48
RPB11P38902 ECM30YLR436C 3825 nt5.8□□□□□ -1.48
RPB11P38902 HOG1YLR113W 1308 nt5.8□□□□□ -1.48
RPB11P38902 NMD5YJR132W 3147 nt5.8□□□□□ -1.48
RPB11P38902 GTT3YEL017W 1014 nt5.8□□□□□ -1.48
RPB11P38902 YAL045CYAL045C 309 nt5.8□□□□□ -1.48
RPB11P38902 SER2YGR208W 930 nt5.79□□□□□ -1.48
RPB11P38902 YGR210CYGR210C 1236 nt5.79□□□□□ -1.48
RPB11P38902 SUR7YML052W 909 nt5.79□□□□□ -1.48
RPB11P38902 YPL108WYPL108W 507 nt5.79□□□□□ -1.48
RPB11P38902 YBR241CYBR241C 1467 nt5.78□□□□□ -1.48
RPB11P38902 HTS1YPR033C 1641 nt5.78□□□□□ -1.48
RPB11P38902 SUN4YNL066W 1263 nt5.78□□□□□ -1.48
RPB11P38902 AMN1YBR158W 1650 nt5.78□□□□□ -1.48
RPB11P38902 GSH1YJL101C 2037 nt5.77□□□□□ -1.49
RPB11P38902 OPI1YHL020C 1215 nt5.77□□□□□ -1.49
RPB11P38902 YEN1YER041W 2280 nt5.77□□□□□ -1.49
RPB11P38902 YCR025CYCR025C 411 nt5.76□□□□□ -1.49
RPB11P38902 ERS1YCR075C 783 nt5.76□□□□□ -1.49
RPB11P38902 GRH1YDR517W 1119 nt5.76□□□□□ -1.49
RPB11P38902 CIR2YOR356W 1896 nt5.76□□□□□ -1.49
RPB11P38902 YBR232CYBR232C 360 nt5.75□□□□□ -1.49
RPB11P38902 HBN1YCL026C-B 582 nt5.75□□□□□ -1.49
RPB11P38902 BDF2YDL070W 1917 nt5.75□□□□□ -1.49
RPB11P38902 YLL066CYLL066C 3618 nt5.74□□□□□ -1.49
RPB11P38902 GPH1YPR160W 2709 nt5.74□□□□□ -1.49
RPB11P38902 BIM1YER016W 1035 nt5.74□□□□□ -1.49
RPB11P38902 YER156CYER156C 1017 nt5.74□□□□□ -1.49
RPB11P38902 YMR206WYMR206W 942 nt5.74□□□□□ -1.49
RPB11P38902 CCT3YJL014W 1605 nt5.74□□□□□ -1.49
RPB11P38902 STE3YKL178C 1413 nt5.74□□□□□ -1.49
RPB11P38902 ECM38YLR299W 1983 nt5.73□□□□□ -1.49
RPB11P38902 YPR084WYPR084W 1371 nt5.73□□□□□ -1.49
RPB11P38902 RPS6AYPL090C 711 nt5.73□□□□□ -1.49
RPB11P38902 RPS6BYBR181C 711 nt5.73□□□□□ -1.49
RPB11P38902 SGE1YPR198W 1632 nt5.73□□□□□ -1.49
RPB11P38902 TDP1YBR223C 1635 nt5.73□□□□□ -1.49
RPB11P38902 TGA1tA(UGC)A 73 nt5.72□□□□□ -1.49
RPB11P38902 tA(UGC)EtA(UGC)E 73 nt5.72□□□□□ -1.49
RPB11P38902 tA(UGC)GtA(UGC)G 73 nt5.72□□□□□ -1.49
RPB11P38902 tA(UGC)LtA(UGC)L 73 nt5.72□□□□□ -1.49
RPB11P38902 tA(UGC)OtA(UGC)O 73 nt5.72□□□□□ -1.49
RPB11P38902 HSP12YFL014W 330 nt5.72□□□□□ -1.49
RPB11P38902 OPI8YKR035C 642 nt5.72□□□□□ -1.49
RPB11P38902 PHO85YPL031C 918 nt5.72□□□□□ -1.49
RPB11P38902 YPR127WYPR127W 1038 nt5.72□□□□□ -1.49
RPB11P38902 ATP2YJR121W 1536 nt5.72□□□□□ -1.49
RPB11P38902 GLN3YER040W 2193 nt5.72□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 144.5 ms