Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PdgfbP31240 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PdgfbP31240 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PdgfbP31240 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PdgfbP31240 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PdgfbP31240 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.75■■□□□ 1.39
PdgfbP31240 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PdgfbP31240 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PdgfbP31240 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.74■■□□□ 1.39
PdgfbP31240 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.74■■□□□ 1.39
PdgfbP31240 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.73■■□□□ 1.39
PdgfbP31240 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PdgfbP31240 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PdgfbP31240 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PdgfbP31240 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PdgfbP31240 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.71■■□□□ 1.39
PdgfbP31240 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PdgfbP31240 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PdgfbP31240 Terc-201ENSMUST00000082862 423 ntBASIC23.69■■□□□ 1.38
PdgfbP31240 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PdgfbP31240 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PdgfbP31240 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.68■■□□□ 1.38
PdgfbP31240 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PdgfbP31240 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PdgfbP31240 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
PdgfbP31240 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PdgfbP31240 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PdgfbP31240 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PdgfbP31240 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PdgfbP31240 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PdgfbP31240 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PdgfbP31240 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.65■■□□□ 1.38
PdgfbP31240 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PdgfbP31240 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PdgfbP31240 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.64■■□□□ 1.37
PdgfbP31240 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PdgfbP31240 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PdgfbP31240 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PdgfbP31240 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PdgfbP31240 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.63■■□□□ 1.37
PdgfbP31240 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.62■■□□□ 1.37
PdgfbP31240 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PdgfbP31240 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PdgfbP31240 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.62■■□□□ 1.37
PdgfbP31240 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
PdgfbP31240 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PdgfbP31240 Gm13238-201ENSMUST00000117655 780 ntBASIC23.61■■□□□ 1.37
PdgfbP31240 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PdgfbP31240 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Gm15820-201ENSMUST00000201566 728 ntBASIC23.6■■□□□ 1.37
PdgfbP31240 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PdgfbP31240 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PdgfbP31240 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.59■■□□□ 1.37
PdgfbP31240 Rps24-207ENSMUST00000224568 714 ntBASIC23.59■■□□□ 1.37
PdgfbP31240 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PdgfbP31240 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PdgfbP31240 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PdgfbP31240 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
PdgfbP31240 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
PdgfbP31240 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PdgfbP31240 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
PdgfbP31240 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.57■■□□□ 1.36
PdgfbP31240 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.57■■□□□ 1.36
PdgfbP31240 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PdgfbP31240 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PdgfbP31240 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.56■■□□□ 1.36
PdgfbP31240 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PdgfbP31240 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.56■■□□□ 1.36
PdgfbP31240 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PdgfbP31240 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.55■■□□□ 1.36
PdgfbP31240 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.55■■□□□ 1.36
PdgfbP31240 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
PdgfbP31240 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PdgfbP31240 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PdgfbP31240 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PdgfbP31240 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
PdgfbP31240 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PdgfbP31240 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PdgfbP31240 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PdgfbP31240 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PdgfbP31240 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PdgfbP31240 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PdgfbP31240 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PdgfbP31240 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PdgfbP31240 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PdgfbP31240 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PdgfbP31240 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PdgfbP31240 Gm14117-201ENSMUST00000122417 843 ntBASIC23.49■■□□□ 1.35
PdgfbP31240 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
PdgfbP31240 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PdgfbP31240 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
PdgfbP31240 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PdgfbP31240 Gm43566-201ENSMUST00000196851 808 ntBASIC23.48■■□□□ 1.35
PdgfbP31240 Gm45102-201ENSMUST00000207427 857 ntBASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms