Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ccl5P30882 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ccl5P30882 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Ccl5P30882 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ccl5P30882 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Ccl5P30882 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.72■■□□□ 1.55
Ccl5P30882 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.71■■□□□ 1.55
Ccl5P30882 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ccl5P30882 Gm43566-201ENSMUST00000196851 808 ntBASIC24.7■■□□□ 1.54
Ccl5P30882 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.7■■□□□ 1.54
Ccl5P30882 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Ccl5P30882 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ccl5P30882 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ccl5P30882 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
Ccl5P30882 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.68■■□□□ 1.54
Ccl5P30882 Terc-201ENSMUST00000082862 423 ntBASIC24.68■■□□□ 1.54
Ccl5P30882 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ccl5P30882 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ccl5P30882 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ccl5P30882 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ccl5P30882 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.67■■□□□ 1.54
Ccl5P30882 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Ccl5P30882 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.66■■□□□ 1.54
Ccl5P30882 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ccl5P30882 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
Ccl5P30882 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ccl5P30882 Gm13238-201ENSMUST00000117655 780 ntBASIC24.66■■□□□ 1.54
Ccl5P30882 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ccl5P30882 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ccl5P30882 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ccl5P30882 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ccl5P30882 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.65■■□□□ 1.54
Ccl5P30882 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.64■■□□□ 1.54
Ccl5P30882 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.64■■□□□ 1.54
Ccl5P30882 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.64■■□□□ 1.54
Ccl5P30882 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.64■■□□□ 1.54
Ccl5P30882 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.63■■□□□ 1.53
Ccl5P30882 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ccl5P30882 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ccl5P30882 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.62■■□□□ 1.53
Ccl5P30882 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ccl5P30882 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ccl5P30882 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ccl5P30882 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccl5P30882 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.6■■□□□ 1.53
Ccl5P30882 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
Ccl5P30882 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccl5P30882 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.6■■□□□ 1.53
Ccl5P30882 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ccl5P30882 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ccl5P30882 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Ccl5P30882 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ccl5P30882 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ccl5P30882 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccl5P30882 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ccl5P30882 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Ccl5P30882 Gm45444-201ENSMUST00000211394 898 ntBASIC24.56■■□□□ 1.52
Ccl5P30882 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccl5P30882 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccl5P30882 Gm9959-201ENSMUST00000068277 390 ntBASIC24.56■■□□□ 1.52
Ccl5P30882 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccl5P30882 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
Ccl5P30882 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccl5P30882 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.56■■□□□ 1.52
Ccl5P30882 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccl5P30882 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.55■■□□□ 1.52
Ccl5P30882 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ccl5P30882 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.55■■□□□ 1.52
Ccl5P30882 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.54■■□□□ 1.52
Ccl5P30882 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC24.54■■□□□ 1.52
Ccl5P30882 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ccl5P30882 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccl5P30882 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Ccl5P30882 Gm44428-201ENSMUST00000204474 874 ntBASIC24.52■■□□□ 1.52
Ccl5P30882 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccl5P30882 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.51■■□□□ 1.51
Ccl5P30882 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ccl5P30882 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ccl5P30882 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Ccl5P30882 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Ccl5P30882 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccl5P30882 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.49■■□□□ 1.51
Ccl5P30882 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ccl5P30882 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ccl5P30882 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.48■■□□□ 1.51
Ccl5P30882 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Ccl5P30882 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ccl5P30882 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.47■■□□□ 1.51
Ccl5P30882 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.47■■□□□ 1.51
Ccl5P30882 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ccl5P30882 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Ccl5P30882 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ccl5P30882 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Ccl5P30882 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ccl5P30882 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.45■■□□□ 1.5
Ccl5P30882 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Ccl5P30882 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccl5P30882 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ccl5P30882 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.44■■□□□ 1.5
Ccl5P30882 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms