Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATF4P18848 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATF4P18848 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF4P18848 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF4P18848 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATF4P18848 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ATF4P18848 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF4P18848 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF4P18848 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.72■□□□□ 0.91
ATF4P18848 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF4P18848 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF4P18848 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATF4P18848 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATF4P18848 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATF4P18848 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATF4P18848 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ATF4P18848 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATF4P18848 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATF4P18848 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATF4P18848 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATF4P18848 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ATF4P18848 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATF4P18848 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.69■□□□□ 0.9
ATF4P18848 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.69■□□□□ 0.9
ATF4P18848 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ATF4P18848 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATF4P18848 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
ATF4P18848 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATF4P18848 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATF4P18848 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.68■□□□□ 0.9
ATF4P18848 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATF4P18848 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
ATF4P18848 AC012676.1-201ENST00000574705 1949 ntBASIC20.67■□□□□ 0.9
ATF4P18848 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATF4P18848 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATF4P18848 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.66■□□□□ 0.9
ATF4P18848 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.66■□□□□ 0.9
ATF4P18848 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.66■□□□□ 0.9
ATF4P18848 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATF4P18848 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF4P18848 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF4P18848 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATF4P18848 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATF4P18848 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF4P18848 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.64■□□□□ 0.89
ATF4P18848 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ATF4P18848 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF4P18848 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATF4P18848 DRD5P2-201ENST00000421395 2012 ntBASIC20.63■□□□□ 0.89
ATF4P18848 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF4P18848 AC079834.2-201ENST00000609776 1949 ntBASIC20.63■□□□□ 0.89
ATF4P18848 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.63■□□□□ 0.89
ATF4P18848 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF4P18848 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF4P18848 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF4P18848 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF4P18848 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF4P18848 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF4P18848 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF4P18848 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ATF4P18848 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF4P18848 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF4P18848 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATF4P18848 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.61■□□□□ 0.89
ATF4P18848 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATF4P18848 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATF4P18848 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
ATF4P18848 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATF4P18848 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.6■□□□□ 0.89
ATF4P18848 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATF4P18848 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATF4P18848 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.59■□□□□ 0.89
ATF4P18848 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATF4P18848 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATF4P18848 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATF4P18848 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.59■□□□□ 0.89
ATF4P18848 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATF4P18848 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.58■□□□□ 0.89
ATF4P18848 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATF4P18848 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATF4P18848 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATF4P18848 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATF4P18848 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATF4P18848 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATF4P18848 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.58■□□□□ 0.88
ATF4P18848 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF4P18848 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF4P18848 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.57■□□□□ 0.88
ATF4P18848 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF4P18848 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATF4P18848 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF4P18848 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.56■□□□□ 0.88
ATF4P18848 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF4P18848 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.55■□□□□ 0.88
ATF4P18848 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATF4P18848 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATF4P18848 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATF4P18848 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
ATF4P18848 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATF4P18848 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms