Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Irf1P15314 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Irf1P15314 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Irf1P15314 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.92■□□□□ 0.94
Irf1P15314 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Irf1P15314 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Irf1P15314 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Irf1P15314 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Irf1P15314 Gm11175-201ENSMUST00000116172 543 ntBASIC20.91■□□□□ 0.94
Irf1P15314 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Irf1P15314 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.9■□□□□ 0.94
Irf1P15314 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Irf1P15314 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Irf1P15314 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Irf1P15314 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Irf1P15314 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Irf1P15314 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Irf1P15314 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Irf1P15314 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Irf1P15314 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.88■□□□□ 0.93
Irf1P15314 Mir3960-201ENSMUST00000198213 73 ntBASIC20.88■□□□□ 0.93
Irf1P15314 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Irf1P15314 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Irf1P15314 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Irf1P15314 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Irf1P15314 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Irf1P15314 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Irf1P15314 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Irf1P15314 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Irf1P15314 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Irf1P15314 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Irf1P15314 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Irf1P15314 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Irf1P15314 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.86■□□□□ 0.93
Irf1P15314 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.86■□□□□ 0.93
Irf1P15314 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Irf1P15314 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Irf1P15314 Scarna2-201ENSMUST00000157560 414 ntBASIC20.85■□□□□ 0.93
Irf1P15314 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.85■□□□□ 0.93
Irf1P15314 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.85■□□□□ 0.93
Irf1P15314 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Irf1P15314 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Irf1P15314 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.84■□□□□ 0.93
Irf1P15314 Mir6538-201ENSMUST00000183713 110 ntBASIC20.83■□□□□ 0.93
Irf1P15314 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.83■□□□□ 0.93
Irf1P15314 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.83■□□□□ 0.92
Irf1P15314 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Irf1P15314 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Irf1P15314 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Irf1P15314 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Irf1P15314 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Irf1P15314 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Irf1P15314 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.81■□□□□ 0.92
Irf1P15314 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Irf1P15314 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.81■□□□□ 0.92
Irf1P15314 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Irf1P15314 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Irf1P15314 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.8■□□□□ 0.92
Irf1P15314 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Irf1P15314 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Irf1P15314 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Irf1P15314 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.79■□□□□ 0.92
Irf1P15314 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Irf1P15314 Gm11687-201ENSMUST00000118911 886 ntBASIC20.79■□□□□ 0.92
Irf1P15314 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Irf1P15314 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Irf1P15314 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Irf1P15314 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Irf1P15314 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Irf1P15314 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Irf1P15314 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Irf1P15314 Gm45364-201ENSMUST00000210883 159 ntBASIC20.78■□□□□ 0.92
Irf1P15314 Gm16437-201ENSMUST00000025669 507 ntBASIC20.78■□□□□ 0.92
Irf1P15314 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Irf1P15314 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Irf1P15314 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf1P15314 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.77■□□□□ 0.92
Irf1P15314 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Irf1P15314 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Irf1P15314 Gm9806-201ENSMUST00000051080 552 ntBASIC20.77■□□□□ 0.92
Irf1P15314 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf1P15314 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
Irf1P15314 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf1P15314 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
Irf1P15314 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Irf1P15314 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.76■□□□□ 0.91
Irf1P15314 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf1P15314 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf1P15314 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.76■□□□□ 0.91
Irf1P15314 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.75■□□□□ 0.91
Irf1P15314 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf1P15314 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf1P15314 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf1P15314 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Irf1P15314 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf1P15314 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Irf1P15314 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf1P15314 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf1P15314 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf1P15314 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms