Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 RFC1YOR217W 2586 nt7.06□□□□□ -1.28
RPL40BP0CH09 IMG1YCR046C 510 nt7.06□□□□□ -1.28
RPL40BP0CH09 YDL144CYDL144C 1071 nt7.06□□□□□ -1.28
RPL40BP0CH09 HIS3YOR202W 663 nt7.06□□□□□ -1.28
RPL40BP0CH09 TOK1YJL093C 2076 nt7.05□□□□□ -1.28
RPL40BP0CH09 YIL029W-AYIL029W-A 372 nt7.05□□□□□ -1.28
RPL40BP0CH09 MRPL35YDR322W 1104 nt7.04□□□□□ -1.28
RPL40BP0CH09 YLR162WYLR162W 357 nt7.03□□□□□ -1.28
RPL40BP0CH09 snR30snR30 606 nt7.03□□□□□ -1.28
RPL40BP0CH09 ITR1YDR497C 1755 nt7.03□□□□□ -1.28
RPL40BP0CH09 RAD59YDL059C 717 nt7.02□□□□□ -1.29
RPL40BP0CH09 DST1YGL043W 930 nt7.02□□□□□ -1.29
RPL40BP0CH09 TES1YJR019C 1050 nt7.02□□□□□ -1.29
RPL40BP0CH09 MRPL19YNL185C 477 nt7.02□□□□□ -1.29
RPL40BP0CH09 ALR1YOL130W 2580 nt7.02□□□□□ -1.29
RPL40BP0CH09 PRC1YMR297W 1599 nt7.01□□□□□ -1.29
RPL40BP0CH09 NDE2YDL085W 1638 nt7.01□□□□□ -1.29
RPL40BP0CH09 TMS1YDR105C 1422 nt7.01□□□□□ -1.29
RPL40BP0CH09 FRE6YLL051C 2139 nt7□□□□□ -1.29
RPL40BP0CH09 HRB1YNL004W 1365 nt7□□□□□ -1.29
RPL40BP0CH09 YEL034C-AYEL034C-A 603 nt7□□□□□ -1.29
RPL40BP0CH09 YEL075W-AYEL075W-A 612 nt7□□□□□ -1.29
RPL40BP0CH09 OPI1YHL020C 1215 nt7□□□□□ -1.29
RPL40BP0CH09 YLR463CYLR463C 552 nt7□□□□□ -1.29
RPL40BP0CH09 BUB2YMR055C 921 nt7□□□□□ -1.29
RPL40BP0CH09 COQ3YOL096C 939 nt7□□□□□ -1.29
RPL40BP0CH09 DML1YMR211W 1428 nt7□□□□□ -1.29
RPL40BP0CH09 TOM71YHR117W 1920 nt6.99□□□□□ -1.29
RPL40BP0CH09 COX15YER141W 1461 nt6.99□□□□□ -1.29
RPL40BP0CH09 NFS1YCL017C 1494 nt6.99□□□□□ -1.29
RPL40BP0CH09 RBS1YDL189W 1374 nt6.99□□□□□ -1.29
RPL40BP0CH09 PDA1YER178W 1263 nt6.99□□□□□ -1.29
RPL40BP0CH09 NAF1YNL124W 1479 nt6.98□□□□□ -1.29
RPL40BP0CH09 CHA1YCL064C 1083 nt6.98□□□□□ -1.29
RPL40BP0CH09 YHR218W-AYHR218W-A 318 nt6.98□□□□□ -1.29
RPL40BP0CH09 YJL009WYJL009W 327 nt6.98□□□□□ -1.29
RPL40BP0CH09 YBL112CYBL112C 318 nt6.98□□□□□ -1.29
RPL40BP0CH09 YPL264CYPL264C 1062 nt6.98□□□□□ -1.29
RPL40BP0CH09 SSC1YJR045C 1965 nt6.98□□□□□ -1.29
RPL40BP0CH09 SPE4YLR146C 903 nt6.97□□□□□ -1.29
RPL40BP0CH09 ATP10YLR393W 840 nt6.97□□□□□ -1.29
RPL40BP0CH09 YOL046CYOL046C 675 nt6.97□□□□□ -1.29
RPL40BP0CH09 BEM1YBR200W 1656 nt6.96□□□□□ -1.29
RPL40BP0CH09 FSF1YOR271C 984 nt6.96□□□□□ -1.3
RPL40BP0CH09 DPM1YPR183W 804 nt6.96□□□□□ -1.3
RPL40BP0CH09 ARG7YMR062C 1326 nt6.96□□□□□ -1.3
RPL40BP0CH09 TOP3YLR234W 1971 nt6.95□□□□□ -1.3
RPL40BP0CH09 YNL140CYNL140C 570 nt6.95□□□□□ -1.3
RPL40BP0CH09 ILV6YCL009C 930 nt6.95□□□□□ -1.3
RPL40BP0CH09 HXT8YJL214W 1710 nt6.95□□□□□ -1.3
RPL40BP0CH09 OSM1YJR051W 1506 nt6.95□□□□□ -1.3
RPL40BP0CH09 WSC4YHL028W 1818 nt6.93□□□□□ -1.3
RPL40BP0CH09 PRY2YKR013W 990 nt6.93□□□□□ -1.3
RPL40BP0CH09 PSA1YDL055C 1086 nt6.92□□□□□ -1.3
RPL40BP0CH09 PIL1YGR086C 1020 nt6.92□□□□□ -1.3
RPL40BP0CH09 RNH201YNL072W 924 nt6.92□□□□□ -1.3
RPL40BP0CH09 HXT9YJL219W 1704 nt6.92□□□□□ -1.3
RPL40BP0CH09 RRP43YCR035C 1185 nt6.91□□□□□ -1.3
RPL40BP0CH09 RPL2AYFR031C-A 765 nt6.91□□□□□ -1.3
RPL40BP0CH09 YBR056WYBR056W 1506 nt6.91□□□□□ -1.3
RPL40BP0CH09 YJL163CYJL163C 1668 nt6.9□□□□□ -1.3
RPL40BP0CH09 RRP9YPR137W 1722 nt6.9□□□□□ -1.3
RPL40BP0CH09 GGC1YDL198C 903 nt6.9□□□□□ -1.3
RPL40BP0CH09 YMR252CYMR252C 405 nt6.9□□□□□ -1.3
RPL40BP0CH09 PEX3YDR329C 1326 nt6.9□□□□□ -1.3
RPL40BP0CH09 MET13YGL125W 1803 nt6.9□□□□□ -1.31
RPL40BP0CH09 INM1YHR046C 888 nt6.89□□□□□ -1.31
RPL40BP0CH09 YPR076WYPR076W 375 nt6.89□□□□□ -1.31
RPL40BP0CH09 ERR3YMR323W 1314 nt6.89□□□□□ -1.31
RPL40BP0CH09 ERR1YOR393W 1314 nt6.89□□□□□ -1.31
RPL40BP0CH09 ERR2YPL281C 1314 nt6.89□□□□□ -1.31
RPL40BP0CH09 BSP1YPR171W 1731 nt6.89□□□□□ -1.31
RPL40BP0CH09 BUD31YCR063W 474 nt6.88□□□□□ -1.31
RPL40BP0CH09 PRE3YJL001W 648 nt6.88□□□□□ -1.31
RPL40BP0CH09 FRT1YOR324C 1809 nt6.87□□□□□ -1.31
RPL40BP0CH09 MRN1YPL184C 1839 nt6.87□□□□□ -1.31
RPL40BP0CH09 INO1YJL153C 1602 nt6.87□□□□□ -1.31
RPL40BP0CH09 YML018CYML018C 1182 nt6.87□□□□□ -1.31
RPL40BP0CH09 YMR253CYMR253C 1245 nt6.87□□□□□ -1.31
RPL40BP0CH09 SGF73YGL066W 1974 nt6.86□□□□□ -1.31
RPL40BP0CH09 LCL3YGL085W 825 nt6.86□□□□□ -1.31
RPL40BP0CH09 YNL092WYNL092W 1203 nt6.86□□□□□ -1.31
RPL40BP0CH09 ELA1YNL230C 1140 nt6.86□□□□□ -1.31
RPL40BP0CH09 TGL5YOR081C 2250 nt6.86□□□□□ -1.31
RPL40BP0CH09 PPH21YDL134C 1110 nt6.85□□□□□ -1.31
RPL40BP0CH09 TFG2YGR005C 1203 nt6.85□□□□□ -1.31
RPL40BP0CH09 LRO1YNR008W 1986 nt6.84□□□□□ -1.31
RPL40BP0CH09 STE3YKL178C 1413 nt6.84□□□□□ -1.32
RPL40BP0CH09 FMP40YPL222W 2067 nt6.83□□□□□ -1.32
RPL40BP0CH09 YPQ2YDR352W 954 nt6.83□□□□□ -1.32
RPL40BP0CH09 PAM17YKR065C 594 nt6.83□□□□□ -1.32
RPL40BP0CH09 UIP4YPL186C 915 nt6.83□□□□□ -1.32
RPL40BP0CH09 YCL049CYCL049C 939 nt6.83□□□□□ -1.32
RPL40BP0CH09 OSW2YLR054C 2175 nt6.83□□□□□ -1.32
RPL40BP0CH09 PMA2YPL036W 2844 nt6.83□□□□□ -1.32
RPL40BP0CH09 SPS1YDR523C 1473 nt6.82□□□□□ -1.32
RPL40BP0CH09 TDA4YJR116W 840 nt6.82□□□□□ -1.32
RPL40BP0CH09 RCF1YML030W 480 nt6.82□□□□□ -1.32
RPL40BP0CH09 MRPS18YNL306W 654 nt6.82□□□□□ -1.32
RPL40BP0CH09 INP54YOL065C 1155 nt6.82□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 63.3 ms