Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxb2P0C1T1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.06■□□□□ 0.8
Hoxb2P0C1T1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxb2P0C1T1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxb2P0C1T1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxb2P0C1T1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Hoxb2P0C1T1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Hoxb2P0C1T1 Gm16437-201ENSMUST00000025669 507 ntBASIC20.05■□□□□ 0.8
Hoxb2P0C1T1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Hoxb2P0C1T1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxb2P0C1T1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxb2P0C1T1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hoxb2P0C1T1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hoxb2P0C1T1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxb2P0C1T1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxb2P0C1T1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxb2P0C1T1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxb2P0C1T1 Gm11687-201ENSMUST00000118911 886 ntBASIC20.02■□□□□ 0.8
Hoxb2P0C1T1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hoxb2P0C1T1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.02■□□□□ 0.79
Hoxb2P0C1T1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxb2P0C1T1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.01■□□□□ 0.79
Hoxb2P0C1T1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxb2P0C1T1 Cap2-205ENSMUST00000225824 1634 ntBASIC20.01■□□□□ 0.79
Hoxb2P0C1T1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxb2P0C1T1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxb2P0C1T1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxb2P0C1T1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxb2P0C1T1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxb2P0C1T1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxb2P0C1T1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxb2P0C1T1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxb2P0C1T1 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.96■□□□□ 0.79
Hoxb2P0C1T1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxb2P0C1T1 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.96■□□□□ 0.79
Hoxb2P0C1T1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxb2P0C1T1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hoxb2P0C1T1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxb2P0C1T1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hoxb2P0C1T1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxb2P0C1T1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.94■□□□□ 0.78
Hoxb2P0C1T1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxb2P0C1T1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.94■□□□□ 0.78
Hoxb2P0C1T1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxb2P0C1T1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxb2P0C1T1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.94■□□□□ 0.78
Hoxb2P0C1T1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxb2P0C1T1 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.93■□□□□ 0.78
Hoxb2P0C1T1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxb2P0C1T1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxb2P0C1T1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.93■□□□□ 0.78
Hoxb2P0C1T1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxb2P0C1T1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxb2P0C1T1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxb2P0C1T1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.92■□□□□ 0.78
Hoxb2P0C1T1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.92■□□□□ 0.78
Hoxb2P0C1T1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hoxb2P0C1T1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxb2P0C1T1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxb2P0C1T1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxb2P0C1T1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxb2P0C1T1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxb2P0C1T1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxb2P0C1T1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxb2P0C1T1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Hoxb2P0C1T1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxb2P0C1T1 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.9■□□□□ 0.78
Hoxb2P0C1T1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxb2P0C1T1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxb2P0C1T1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxb2P0C1T1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.9■□□□□ 0.78
Hoxb2P0C1T1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxb2P0C1T1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxb2P0C1T1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxb2P0C1T1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxb2P0C1T1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxb2P0C1T1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Gm12366-201ENSMUST00000121722 873 ntBASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Terc-201ENSMUST00000082862 423 ntBASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 Gm5786-201ENSMUST00000085368 882 ntBASIC19.88■□□□□ 0.77
Hoxb2P0C1T1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.87■□□□□ 0.77
Hoxb2P0C1T1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxb2P0C1T1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.87■□□□□ 0.77
Hoxb2P0C1T1 Gm27502-201ENSMUST00000183495 199 ntBASIC19.87■□□□□ 0.77
Hoxb2P0C1T1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Hoxb2P0C1T1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxb2P0C1T1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxb2P0C1T1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxb2P0C1T1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms