Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rc3h2P0C090 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rc3h2P0C090 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rc3h2P0C090 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rc3h2P0C090 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rc3h2P0C090 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rc3h2P0C090 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rc3h2P0C090 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Rc3h2P0C090 Gm27502-201ENSMUST00000183495 199 ntBASIC23.54■■□□□ 1.36
Rc3h2P0C090 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.54■■□□□ 1.36
Rc3h2P0C090 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rc3h2P0C090 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rc3h2P0C090 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.53■■□□□ 1.36
Rc3h2P0C090 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rc3h2P0C090 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rc3h2P0C090 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Rc3h2P0C090 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.51■■□□□ 1.35
Rc3h2P0C090 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rc3h2P0C090 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rc3h2P0C090 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rc3h2P0C090 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.5■■□□□ 1.35
Rc3h2P0C090 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.49■■□□□ 1.35
Rc3h2P0C090 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rc3h2P0C090 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rc3h2P0C090 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rc3h2P0C090 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.48■■□□□ 1.35
Rc3h2P0C090 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rc3h2P0C090 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rc3h2P0C090 Gm7332-201ENSMUST00000118351 454 ntBASIC23.47■■□□□ 1.35
Rc3h2P0C090 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.47■■□□□ 1.35
Rc3h2P0C090 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rc3h2P0C090 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rc3h2P0C090 Terc-201ENSMUST00000082862 423 ntBASIC23.47■■□□□ 1.35
Rc3h2P0C090 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rc3h2P0C090 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rc3h2P0C090 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rc3h2P0C090 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.46■■□□□ 1.35
Rc3h2P0C090 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.46■■□□□ 1.35
Rc3h2P0C090 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.45■■□□□ 1.35
Rc3h2P0C090 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Rc3h2P0C090 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
Rc3h2P0C090 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.45■■□□□ 1.34
Rc3h2P0C090 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rc3h2P0C090 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Rc3h2P0C090 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rc3h2P0C090 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Rc3h2P0C090 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.44■■□□□ 1.34
Rc3h2P0C090 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h2P0C090 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h2P0C090 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h2P0C090 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h2P0C090 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h2P0C090 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h2P0C090 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rc3h2P0C090 Gm14523-201ENSMUST00000117260 558 ntBASIC23.43■■□□□ 1.34
Rc3h2P0C090 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Rc3h2P0C090 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rc3h2P0C090 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rc3h2P0C090 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rc3h2P0C090 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rc3h2P0C090 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rc3h2P0C090 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.41■■□□□ 1.34
Rc3h2P0C090 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rc3h2P0C090 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rc3h2P0C090 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rc3h2P0C090 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.4■■□□□ 1.34
Rc3h2P0C090 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rc3h2P0C090 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.4■■□□□ 1.34
Rc3h2P0C090 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rc3h2P0C090 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rc3h2P0C090 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rc3h2P0C090 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rc3h2P0C090 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rc3h2P0C090 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rc3h2P0C090 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rc3h2P0C090 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rc3h2P0C090 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Rc3h2P0C090 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.37■■□□□ 1.33
Rc3h2P0C090 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rc3h2P0C090 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rc3h2P0C090 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.36■■□□□ 1.33
Rc3h2P0C090 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rc3h2P0C090 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rc3h2P0C090 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rc3h2P0C090 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rc3h2P0C090 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rc3h2P0C090 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rc3h2P0C090 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Rc3h2P0C090 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Rc3h2P0C090 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.34■■□□□ 1.33
Rc3h2P0C090 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rc3h2P0C090 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rc3h2P0C090 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Rc3h2P0C090 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.34■■□□□ 1.33
Rc3h2P0C090 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rc3h2P0C090 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.33■■□□□ 1.33
Rc3h2P0C090 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.32■■□□□ 1.32
Rc3h2P0C090 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.32■■□□□ 1.32
Rc3h2P0C090 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.32■■□□□ 1.32
Rc3h2P0C090 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms