Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.68■■□□□ 1.06
SOD3P08294 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SOD3P08294 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SOD3P08294 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOD3P08294 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.68■■□□□ 1.06
SOD3P08294 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SOD3P08294 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.68■■□□□ 1.06
SOD3P08294 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOD3P08294 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOD3P08294 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOD3P08294 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.67■■□□□ 1.06
SOD3P08294 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOD3P08294 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.66■■□□□ 1.06
SOD3P08294 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOD3P08294 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
SOD3P08294 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOD3P08294 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SOD3P08294 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SOD3P08294 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SOD3P08294 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SOD3P08294 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SOD3P08294 AC012354.3-201ENST00000623734 483 ntBASIC21.62■■□□□ 1.05
SOD3P08294 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SOD3P08294 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SOD3P08294 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.61■■□□□ 1.05
SOD3P08294 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.61■■□□□ 1.05
SOD3P08294 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.61■■□□□ 1.05
SOD3P08294 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SOD3P08294 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.6■■□□□ 1.05
SOD3P08294 AP004833.2-201ENST00000532228 1454 ntBASIC21.6■■□□□ 1.05
SOD3P08294 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.6■■□□□ 1.05
SOD3P08294 AC092296.2-201ENST00000589470 999 ntBASIC21.6■■□□□ 1.05
SOD3P08294 ABCB10P3-201ENST00000561950 2166 ntBASIC21.6■■□□□ 1.05
SOD3P08294 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SOD3P08294 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SOD3P08294 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SOD3P08294 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SOD3P08294 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SOD3P08294 U85056.1-201ENST00000616429 682 ntBASIC21.59■■□□□ 1.05
SOD3P08294 AC100797.4-201ENST00000631653 1827 ntBASIC21.59■■□□□ 1.05
SOD3P08294 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SOD3P08294 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SOD3P08294 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.58■■□□□ 1.05
SOD3P08294 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.58■■□□□ 1.05
SOD3P08294 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SOD3P08294 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.58■■□□□ 1.05
SOD3P08294 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.58■■□□□ 1.05
SOD3P08294 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SOD3P08294 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.58■■□□□ 1.05
SOD3P08294 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SOD3P08294 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SOD3P08294 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.57■■□□□ 1.04
SOD3P08294 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SOD3P08294 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SOD3P08294 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SOD3P08294 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.56■■□□□ 1.04
SOD3P08294 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SOD3P08294 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SOD3P08294 AC126177.7-201ENST00000547904 679 ntBASIC21.55■■□□□ 1.04
SOD3P08294 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SOD3P08294 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SOD3P08294 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SOD3P08294 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SOD3P08294 ECEL1P2-201ENST00000461596 1295 ntBASIC21.54■■□□□ 1.04
SOD3P08294 ABCB10P1-201ENST00000614297 2181 ntBASIC21.54■■□□□ 1.04
SOD3P08294 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.54■■□□□ 1.04
SOD3P08294 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SOD3P08294 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOD3P08294 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOD3P08294 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SOD3P08294 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SOD3P08294 AC018358.1-201ENST00000631079 1402 ntBASIC21.53■■□□□ 1.04
SOD3P08294 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.53■■□□□ 1.04
SOD3P08294 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOD3P08294 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SOD3P08294 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SOD3P08294 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SOD3P08294 AC135731.1-201ENST00000569415 2548 ntBASIC21.51■■□□□ 1.03
SOD3P08294 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SOD3P08294 AL033527.3-201ENST00000566366 1196 ntBASIC21.51■■□□□ 1.03
SOD3P08294 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SOD3P08294 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.51■■□□□ 1.03
SOD3P08294 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SOD3P08294 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.5■■□□□ 1.03
SOD3P08294 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.5■■□□□ 1.03
SOD3P08294 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SOD3P08294 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOD3P08294 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.49■■□□□ 1.03
SOD3P08294 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.48■■□□□ 1.03
SOD3P08294 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SOD3P08294 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SOD3P08294 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SOD3P08294 AL157400.5-201ENST00000507624 621 ntBASIC21.48■■□□□ 1.03
SOD3P08294 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SOD3P08294 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SOD3P08294 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SOD3P08294 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SOD3P08294 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.47■■□□□ 1.03
SOD3P08294 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOD3P08294 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms