Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CTSDP07339 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CTSDP07339 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSDP07339 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.83■□□□□ 0.93
CTSDP07339 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTSDP07339 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTSDP07339 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CTSDP07339 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.82■□□□□ 0.92
CTSDP07339 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.82■□□□□ 0.92
CTSDP07339 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSDP07339 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTSDP07339 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSDP07339 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSDP07339 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSDP07339 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTSDP07339 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSDP07339 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSDP07339 SETD8P1-201ENST00000623146 1180 ntBASIC20.8■□□□□ 0.92
CTSDP07339 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CTSDP07339 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSDP07339 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CTSDP07339 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTSDP07339 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.79■□□□□ 0.92
CTSDP07339 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CTSDP07339 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CTSDP07339 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSDP07339 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CTSDP07339 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTSDP07339 RARRES2P7-201ENST00000567349 469 ntBASIC20.78■□□□□ 0.92
CTSDP07339 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CTSDP07339 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.77■□□□□ 0.92
CTSDP07339 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSDP07339 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSDP07339 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.77■□□□□ 0.92
CTSDP07339 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSDP07339 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.77■□□□□ 0.92
CTSDP07339 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.77■□□□□ 0.92
CTSDP07339 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CTSDP07339 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTSDP07339 DUSP8P4-201ENST00000399538 1761 ntBASIC20.76■□□□□ 0.91
CTSDP07339 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.75■□□□□ 0.91
CTSDP07339 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTSDP07339 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSDP07339 AL391121.1-201ENST00000607967 1349 ntBASIC20.75■□□□□ 0.91
CTSDP07339 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSDP07339 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSDP07339 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTSDP07339 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTSDP07339 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTSDP07339 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTSDP07339 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
CTSDP07339 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTSDP07339 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CTSDP07339 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSDP07339 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTSDP07339 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CTSDP07339 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTSDP07339 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.72■□□□□ 0.91
CTSDP07339 AC092803.2-201ENST00000564287 1899 ntBASIC20.71■□□□□ 0.91
CTSDP07339 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSDP07339 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.71■□□□□ 0.91
CTSDP07339 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSDP07339 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSDP07339 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.71■□□□□ 0.91
CTSDP07339 AC135983.2-203ENST00000454486 1613 ntBASIC20.71■□□□□ 0.91
CTSDP07339 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CTSDP07339 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CTSDP07339 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTSDP07339 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTSDP07339 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTSDP07339 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTSDP07339 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTSDP07339 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSDP07339 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTSDP07339 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CTSDP07339 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CTSDP07339 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSDP07339 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTSDP07339 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSDP07339 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSDP07339 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.68■□□□□ 0.9
CTSDP07339 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSDP07339 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSDP07339 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CTSDP07339 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSDP07339 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSDP07339 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSDP07339 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CTSDP07339 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CTSDP07339 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CTSDP07339 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTSDP07339 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.64■□□□□ 0.9
CTSDP07339 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.64■□□□□ 0.89
CTSDP07339 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CTSDP07339 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CTSDP07339 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CTSDP07339 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.63■□□□□ 0.89
CTSDP07339 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTSDP07339 CAHM-201ENST00000604200 896 ntBASIC20.63■□□□□ 0.89
CTSDP07339 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms