Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.67■■□□□ 1.7
HLA-DQB2P05538 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
HLA-DQB2P05538 MIR7108-201ENST00000614319 87 ntBASIC25.67■■□□□ 1.7
HLA-DQB2P05538 CR559946.2-201ENST00000623684 991 ntBASIC25.67■■□□□ 1.7
HLA-DQB2P05538 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HLA-DQB2P05538 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
HLA-DQB2P05538 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.66■■□□□ 1.7
HLA-DQB2P05538 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
HLA-DQB2P05538 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HLA-DQB2P05538 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HLA-DQB2P05538 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HLA-DQB2P05538 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.63■■□□□ 1.69
HLA-DQB2P05538 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.63■■□□□ 1.69
HLA-DQB2P05538 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
HLA-DQB2P05538 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.62■■□□□ 1.69
HLA-DQB2P05538 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
HLA-DQB2P05538 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HLA-DQB2P05538 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HLA-DQB2P05538 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HLA-DQB2P05538 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HLA-DQB2P05538 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.61■■□□□ 1.69
HLA-DQB2P05538 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HLA-DQB2P05538 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.6■■□□□ 1.69
HLA-DQB2P05538 MIR3648-2-201ENST00000581792 180 ntBASIC25.6■■□□□ 1.69
HLA-DQB2P05538 MIR3648-1-201ENST00000615959 180 ntBASIC25.6■■□□□ 1.69
HLA-DQB2P05538 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
HLA-DQB2P05538 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HLA-DQB2P05538 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
HLA-DQB2P05538 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.59■■□□□ 1.69
HLA-DQB2P05538 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
HLA-DQB2P05538 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
HLA-DQB2P05538 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HLA-DQB2P05538 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.58■■□□□ 1.69
HLA-DQB2P05538 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
HLA-DQB2P05538 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
HLA-DQB2P05538 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
HLA-DQB2P05538 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
HLA-DQB2P05538 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.56■■□□□ 1.68
HLA-DQB2P05538 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.56■■□□□ 1.68
HLA-DQB2P05538 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
HLA-DQB2P05538 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
HLA-DQB2P05538 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
HLA-DQB2P05538 AC016575.1-201ENST00000607026 382 ntBASIC25.55■■□□□ 1.68
HLA-DQB2P05538 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HLA-DQB2P05538 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
HLA-DQB2P05538 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HLA-DQB2P05538 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HLA-DQB2P05538 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
HLA-DQB2P05538 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
HLA-DQB2P05538 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HLA-DQB2P05538 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HLA-DQB2P05538 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HLA-DQB2P05538 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.53■■□□□ 1.68
HLA-DQB2P05538 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
HLA-DQB2P05538 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HLA-DQB2P05538 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.51■■□□□ 1.67
HLA-DQB2P05538 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
HLA-DQB2P05538 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.51■■□□□ 1.67
HLA-DQB2P05538 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
HLA-DQB2P05538 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HLA-DQB2P05538 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HLA-DQB2P05538 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HLA-DQB2P05538 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.5■■□□□ 1.67
HLA-DQB2P05538 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HLA-DQB2P05538 HLA-V-202ENST00000446817 847 ntBASIC25.5■■□□□ 1.67
HLA-DQB2P05538 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HLA-DQB2P05538 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HLA-DQB2P05538 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HLA-DQB2P05538 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HLA-DQB2P05538 AC008813.1-201ENST00000536597 885 ntBASIC25.49■■□□□ 1.67
HLA-DQB2P05538 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
HLA-DQB2P05538 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.48■■□□□ 1.67
HLA-DQB2P05538 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HLA-DQB2P05538 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HLA-DQB2P05538 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HLA-DQB2P05538 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HLA-DQB2P05538 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
HLA-DQB2P05538 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
HLA-DQB2P05538 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HLA-DQB2P05538 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.46■■□□□ 1.67
HLA-DQB2P05538 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
HLA-DQB2P05538 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
HLA-DQB2P05538 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.67
HLA-DQB2P05538 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.45■■□□□ 1.67
HLA-DQB2P05538 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.45■■□□□ 1.66
HLA-DQB2P05538 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
HLA-DQB2P05538 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.44■■□□□ 1.66
HLA-DQB2P05538 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
HLA-DQB2P05538 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.44■■□□□ 1.66
HLA-DQB2P05538 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HLA-DQB2P05538 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
HLA-DQB2P05538 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.44■■□□□ 1.66
HLA-DQB2P05538 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
HLA-DQB2P05538 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HLA-DQB2P05538 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.43■■□□□ 1.66
HLA-DQB2P05538 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
HLA-DQB2P05538 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
HLA-DQB2P05538 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
HLA-DQB2P05538 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.42■■□□□ 1.66
HLA-DQB2P05538 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms