Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRAP04437 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRAP04437 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRAP04437 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRAP04437 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TCRAP04437 AL391121.1-201ENST00000607967 1349 ntBASIC19.06■□□□□ 0.64
TCRAP04437 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRAP04437 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRAP04437 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRAP04437 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRAP04437 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRAP04437 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TCRAP04437 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRAP04437 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.04■□□□□ 0.64
TCRAP04437 AC020928.2-201ENST00000588717 2197 ntBASIC19.04■□□□□ 0.64
TCRAP04437 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRAP04437 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRAP04437 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TCRAP04437 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TCRAP04437 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRAP04437 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
TCRAP04437 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TCRAP04437 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRAP04437 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRAP04437 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRAP04437 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.02■□□□□ 0.64
TCRAP04437 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.02■□□□□ 0.64
TCRAP04437 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRAP04437 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TCRAP04437 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.02■□□□□ 0.63
TCRAP04437 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRAP04437 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRAP04437 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TCRAP04437 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRAP04437 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.01■□□□□ 0.63
TCRAP04437 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TCRAP04437 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRAP04437 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRAP04437 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.01■□□□□ 0.63
TCRAP04437 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRAP04437 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
TCRAP04437 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TCRAP04437 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TCRAP04437 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19■□□□□ 0.63
TCRAP04437 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19■□□□□ 0.63
TCRAP04437 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRAP04437 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRAP04437 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRAP04437 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRAP04437 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRAP04437 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRAP04437 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRAP04437 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRAP04437 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRAP04437 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TCRAP04437 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRAP04437 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TCRAP04437 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRAP04437 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TCRAP04437 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TCRAP04437 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRAP04437 AC135983.2-203ENST00000454486 1613 ntBASIC18.97■□□□□ 0.63
TCRAP04437 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRAP04437 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.97■□□□□ 0.63
TCRAP04437 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TCRAP04437 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRAP04437 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.96■□□□□ 0.63
TCRAP04437 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TCRAP04437 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRAP04437 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRAP04437 CAHM-201ENST00000604200 896 ntBASIC18.95■□□□□ 0.62
TCRAP04437 DUSP8P4-201ENST00000399538 1761 ntBASIC18.95■□□□□ 0.62
TCRAP04437 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRAP04437 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRAP04437 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRAP04437 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRAP04437 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRAP04437 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.94■□□□□ 0.62
TCRAP04437 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRAP04437 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRAP04437 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRAP04437 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
TCRAP04437 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TCRAP04437 AC092803.2-201ENST00000564287 1899 ntBASIC18.93■□□□□ 0.62
TCRAP04437 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TCRAP04437 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRAP04437 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRAP04437 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRAP04437 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRAP04437 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TCRAP04437 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRAP04437 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TCRAP04437 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRAP04437 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRAP04437 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TCRAP04437 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRAP04437 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRAP04437 WHAMMP2-203ENST00000563942 1603 ntBASIC18.91■□□□□ 0.62
TCRAP04437 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.91■□□□□ 0.62
TCRAP04437 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms