Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 DUX4L29-201ENST00000425409 679 ntBASIC20.88■□□□□ 0.93
GAPDHP04406 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GAPDHP04406 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GAPDHP04406 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GAPDHP04406 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GAPDHP04406 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GAPDHP04406 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GAPDHP04406 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.87■□□□□ 0.93
GAPDHP04406 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
GAPDHP04406 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.87■□□□□ 0.93
GAPDHP04406 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
GAPDHP04406 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GAPDHP04406 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GAPDHP04406 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GAPDHP04406 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
GAPDHP04406 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GAPDHP04406 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.85■□□□□ 0.93
GAPDHP04406 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GAPDHP04406 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
GAPDHP04406 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.85■□□□□ 0.93
GAPDHP04406 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GAPDHP04406 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.84■□□□□ 0.93
GAPDHP04406 LINC00273-201ENST00000539813 1452 ntBASIC20.84■□□□□ 0.93
GAPDHP04406 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
GAPDHP04406 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GAPDHP04406 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GAPDHP04406 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GAPDHP04406 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
GAPDHP04406 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.84■□□□□ 0.93
GAPDHP04406 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GAPDHP04406 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
GAPDHP04406 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GAPDHP04406 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.83■□□□□ 0.92
GAPDHP04406 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GAPDHP04406 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GAPDHP04406 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GAPDHP04406 AC021231.2-201ENST00000594613 730 ntBASIC20.82■□□□□ 0.92
GAPDHP04406 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GAPDHP04406 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
GAPDHP04406 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GAPDHP04406 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GAPDHP04406 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.81■□□□□ 0.92
GAPDHP04406 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GAPDHP04406 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GAPDHP04406 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
GAPDHP04406 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GAPDHP04406 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.81■□□□□ 0.92
GAPDHP04406 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GAPDHP04406 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
GAPDHP04406 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.81■□□□□ 0.92
GAPDHP04406 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.81■□□□□ 0.92
GAPDHP04406 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
GAPDHP04406 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.8■□□□□ 0.92
GAPDHP04406 AC135983.2-203ENST00000454486 1613 ntBASIC20.8■□□□□ 0.92
GAPDHP04406 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GAPDHP04406 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GAPDHP04406 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GAPDHP04406 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GAPDHP04406 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GAPDHP04406 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GAPDHP04406 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.79■□□□□ 0.92
GAPDHP04406 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.79■□□□□ 0.92
GAPDHP04406 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GAPDHP04406 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
GAPDHP04406 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.78■□□□□ 0.92
GAPDHP04406 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
GAPDHP04406 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
GAPDHP04406 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GAPDHP04406 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.78■□□□□ 0.92
GAPDHP04406 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.78■□□□□ 0.92
GAPDHP04406 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.78■□□□□ 0.92
GAPDHP04406 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GAPDHP04406 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.78■□□□□ 0.92
GAPDHP04406 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.78■□□□□ 0.92
GAPDHP04406 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GAPDHP04406 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GAPDHP04406 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.77■□□□□ 0.92
GAPDHP04406 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GAPDHP04406 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.76■□□□□ 0.91
GAPDHP04406 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.76■□□□□ 0.91
GAPDHP04406 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GAPDHP04406 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.76■□□□□ 0.91
GAPDHP04406 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GAPDHP04406 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GAPDHP04406 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
GAPDHP04406 LINC01003-201ENST00000564834 1764 ntBASIC20.75■□□□□ 0.91
GAPDHP04406 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GAPDHP04406 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GAPDHP04406 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.75■□□□□ 0.91
GAPDHP04406 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GAPDHP04406 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
GAPDHP04406 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GAPDHP04406 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GAPDHP04406 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
GAPDHP04406 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.74■□□□□ 0.91
GAPDHP04406 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
GAPDHP04406 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
GAPDHP04406 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GAPDHP04406 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.74■□□□□ 0.91
GAPDHP04406 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms