Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.17■□□□□ 0.98
TFF1P04155 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TFF1P04155 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TFF1P04155 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TFF1P04155 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TFF1P04155 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TFF1P04155 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TFF1P04155 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TFF1P04155 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TFF1P04155 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.14■□□□□ 0.97
TFF1P04155 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TFF1P04155 LINC01003-201ENST00000564834 1764 ntBASIC21.14■□□□□ 0.97
TFF1P04155 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TFF1P04155 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TFF1P04155 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.13■□□□□ 0.97
TFF1P04155 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TFF1P04155 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TFF1P04155 BX255925.1-201ENST00000566954 1854 ntBASIC21.12■□□□□ 0.97
TFF1P04155 AC016575.1-201ENST00000607026 382 ntBASIC21.12■□□□□ 0.97
TFF1P04155 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.12■□□□□ 0.97
TFF1P04155 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.12■□□□□ 0.97
TFF1P04155 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TFF1P04155 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TFF1P04155 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.11■□□□□ 0.97
TFF1P04155 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TFF1P04155 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TFF1P04155 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TFF1P04155 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TFF1P04155 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TFF1P04155 MIR3648-2-201ENST00000581792 180 ntBASIC21.1■□□□□ 0.97
TFF1P04155 MIR3648-1-201ENST00000615959 180 ntBASIC21.1■□□□□ 0.97
TFF1P04155 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TFF1P04155 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TFF1P04155 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.09■□□□□ 0.97
TFF1P04155 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TFF1P04155 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TFF1P04155 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.09■□□□□ 0.97
TFF1P04155 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TFF1P04155 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TFF1P04155 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TFF1P04155 AC018358.1-201ENST00000631079 1402 ntBASIC21.07■□□□□ 0.96
TFF1P04155 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TFF1P04155 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TFF1P04155 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TFF1P04155 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.07■□□□□ 0.96
TFF1P04155 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.07■□□□□ 0.96
TFF1P04155 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TFF1P04155 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TFF1P04155 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TFF1P04155 HLA-V-202ENST00000446817 847 ntBASIC21.06■□□□□ 0.96
TFF1P04155 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TFF1P04155 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TFF1P04155 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TFF1P04155 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.05■□□□□ 0.96
TFF1P04155 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TFF1P04155 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.04■□□□□ 0.96
TFF1P04155 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TFF1P04155 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TFF1P04155 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TFF1P04155 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.03■□□□□ 0.96
TFF1P04155 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TFF1P04155 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.03■□□□□ 0.96
TFF1P04155 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TFF1P04155 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TFF1P04155 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.03■□□□□ 0.96
TFF1P04155 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TFF1P04155 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
TFF1P04155 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.03■□□□□ 0.96
TFF1P04155 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.03■□□□□ 0.96
TFF1P04155 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TFF1P04155 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.02■□□□□ 0.96
TFF1P04155 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TFF1P04155 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TFF1P04155 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TFF1P04155 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.01■□□□□ 0.95
TFF1P04155 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TFF1P04155 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.01■□□□□ 0.95
TFF1P04155 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TFF1P04155 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.01■□□□□ 0.95
TFF1P04155 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TFF1P04155 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TFF1P04155 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21■□□□□ 0.95
TFF1P04155 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TFF1P04155 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TFF1P04155 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TFF1P04155 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TFF1P04155 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TFF1P04155 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TFF1P04155 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21■□□□□ 0.95
TFF1P04155 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TFF1P04155 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TFF1P04155 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.99■□□□□ 0.95
TFF1P04155 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TFF1P04155 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TFF1P04155 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TFF1P04155 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TFF1P04155 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TFF1P04155 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TFF1P04155 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.98■□□□□ 0.95
TFF1P04155 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms