Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HLA-DRB1P01911 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.09■□□□□ 0.81
HLA-DRB1P01911 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DRB1P01911 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DRB1P01911 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
HLA-DRB1P01911 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DRB1P01911 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DRB1P01911 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
HLA-DRB1P01911 CR559946.2-201ENST00000623684 991 ntBASIC20.08■□□□□ 0.81
HLA-DRB1P01911 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HLA-DRB1P01911 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DRB1P01911 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DRB1P01911 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DRB1P01911 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DRB1P01911 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DRB1P01911 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DRB1P01911 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DRB1P01911 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DRB1P01911 MIR3648-2-201ENST00000581792 180 ntBASIC20.06■□□□□ 0.8
HLA-DRB1P01911 MIR3648-1-201ENST00000615959 180 ntBASIC20.06■□□□□ 0.8
HLA-DRB1P01911 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DRB1P01911 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.06■□□□□ 0.8
HLA-DRB1P01911 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.05■□□□□ 0.8
HLA-DRB1P01911 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.05■□□□□ 0.8
HLA-DRB1P01911 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DRB1P01911 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DRB1P01911 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DRB1P01911 AC018358.1-201ENST00000631079 1402 ntBASIC20.04■□□□□ 0.8
HLA-DRB1P01911 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRB1P01911 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.03■□□□□ 0.8
HLA-DRB1P01911 AC008813.1-201ENST00000536597 885 ntBASIC20.03■□□□□ 0.8
HLA-DRB1P01911 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
HLA-DRB1P01911 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRB1P01911 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HLA-DRB1P01911 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRB1P01911 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HLA-DRB1P01911 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HLA-DRB1P01911 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRB1P01911 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRB1P01911 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-DRB1P01911 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DRB1P01911 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
HLA-DRB1P01911 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HLA-DRB1P01911 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HLA-DRB1P01911 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-DRB1P01911 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRB1P01911 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRB1P01911 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HLA-DRB1P01911 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DRB1P01911 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DRB1P01911 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DRB1P01911 AC016575.1-201ENST00000607026 382 ntBASIC20■□□□□ 0.79
HLA-DRB1P01911 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DRB1P01911 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DRB1P01911 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DRB1P01911 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DRB1P01911 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DRB1P01911 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DRB1P01911 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DRB1P01911 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DRB1P01911 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DRB1P01911 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DRB1P01911 BX255925.1-201ENST00000566954 1854 ntBASIC19.97■□□□□ 0.79
HLA-DRB1P01911 LINC01003-201ENST00000564834 1764 ntBASIC19.97■□□□□ 0.79
HLA-DRB1P01911 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DRB1P01911 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DRB1P01911 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.96■□□□□ 0.79
HLA-DRB1P01911 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DRB1P01911 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DRB1P01911 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DRB1P01911 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DRB1P01911 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DRB1P01911 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DRB1P01911 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DRB1P01911 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HLA-DRB1P01911 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
HLA-DRB1P01911 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DRB1P01911 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DRB1P01911 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRB1P01911 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRB1P01911 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRB1P01911 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRB1P01911 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DRB1P01911 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRB1P01911 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRB1P01911 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DRB1P01911 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRB1P01911 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRB1P01911 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRB1P01911 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DRB1P01911 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRB1P01911 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRB1P01911 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.92■□□□□ 0.78
HLA-DRB1P01911 AC148477.6-201ENST00000623746 465 ntBASIC19.92■□□□□ 0.78
HLA-DRB1P01911 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HLA-DRB1P01911 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRB1P01911 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRB1P01911 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HLA-DRB1P01911 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRB1P01911 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms