Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
IghmP01872 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.64■■□□□ 1.06
IghmP01872 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
IghmP01872 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.64■■□□□ 1.05
IghmP01872 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IghmP01872 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IghmP01872 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IghmP01872 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IghmP01872 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
IghmP01872 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
IghmP01872 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IghmP01872 Gm37136-201ENSMUST00000194368 194 ntBASIC21.62■■□□□ 1.05
IghmP01872 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IghmP01872 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IghmP01872 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IghmP01872 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
IghmP01872 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.61■■□□□ 1.05
IghmP01872 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
IghmP01872 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IghmP01872 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
IghmP01872 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.59■■□□□ 1.05
IghmP01872 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
IghmP01872 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
IghmP01872 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
IghmP01872 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
IghmP01872 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.58■■□□□ 1.05
IghmP01872 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
IghmP01872 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.58■■□□□ 1.05
IghmP01872 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.58■■□□□ 1.05
IghmP01872 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
IghmP01872 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
IghmP01872 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
IghmP01872 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
IghmP01872 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.57■■□□□ 1.04
IghmP01872 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IghmP01872 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IghmP01872 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
IghmP01872 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IghmP01872 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.56■■□□□ 1.04
IghmP01872 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.56■■□□□ 1.04
IghmP01872 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IghmP01872 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
IghmP01872 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IghmP01872 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.55■■□□□ 1.04
IghmP01872 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IghmP01872 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
IghmP01872 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IghmP01872 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.54■■□□□ 1.04
IghmP01872 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IghmP01872 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IghmP01872 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
IghmP01872 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
IghmP01872 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IghmP01872 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IghmP01872 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IghmP01872 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
IghmP01872 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
IghmP01872 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
IghmP01872 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
IghmP01872 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IghmP01872 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IghmP01872 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.5■■□□□ 1.03
IghmP01872 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IghmP01872 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
IghmP01872 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IghmP01872 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IghmP01872 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IghmP01872 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.48■■□□□ 1.03
IghmP01872 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
IghmP01872 Gm6821-201ENSMUST00000107540 542 ntBASIC21.46■■□□□ 1.03
IghmP01872 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
IghmP01872 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.46■■□□□ 1.03
IghmP01872 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
IghmP01872 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
IghmP01872 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.44■■□□□ 1.02
IghmP01872 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.44■■□□□ 1.02
IghmP01872 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.44■■□□□ 1.02
IghmP01872 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IghmP01872 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IghmP01872 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IghmP01872 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
IghmP01872 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IghmP01872 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IghmP01872 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
IghmP01872 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IghmP01872 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IghmP01872 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IghmP01872 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
IghmP01872 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IghmP01872 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.41■■□□□ 1.02
IghmP01872 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
IghmP01872 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IghmP01872 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IghmP01872 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
IghmP01872 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
IghmP01872 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
IghmP01872 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
IghmP01872 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
IghmP01872 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.39■■□□□ 1.01
IghmP01872 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms