Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.94■□□□□ 0.62
LTAP01374 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LTAP01374 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LTAP01374 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTAP01374 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTAP01374 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.93■□□□□ 0.62
LTAP01374 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTAP01374 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LTAP01374 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.93■□□□□ 0.62
LTAP01374 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.93■□□□□ 0.62
LTAP01374 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.93■□□□□ 0.62
LTAP01374 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTAP01374 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.92■□□□□ 0.62
LTAP01374 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTAP01374 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTAP01374 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTAP01374 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LTAP01374 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LTAP01374 DUSP8P4-201ENST00000399538 1761 ntBASIC18.91■□□□□ 0.62
LTAP01374 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.9■□□□□ 0.62
LTAP01374 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LTAP01374 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LTAP01374 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LTAP01374 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LTAP01374 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
LTAP01374 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.9■□□□□ 0.62
LTAP01374 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LTAP01374 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LTAP01374 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LTAP01374 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LTAP01374 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LTAP01374 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.89■□□□□ 0.61
LTAP01374 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LTAP01374 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.89■□□□□ 0.61
LTAP01374 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LTAP01374 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
LTAP01374 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.88■□□□□ 0.61
LTAP01374 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTAP01374 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LTAP01374 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTAP01374 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LTAP01374 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTAP01374 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LTAP01374 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LTAP01374 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTAP01374 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTAP01374 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.87■□□□□ 0.61
LTAP01374 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.86■□□□□ 0.61
LTAP01374 AC092803.2-201ENST00000564287 1899 ntBASIC18.86■□□□□ 0.61
LTAP01374 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.86■□□□□ 0.61
LTAP01374 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTAP01374 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.86■□□□□ 0.61
LTAP01374 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LTAP01374 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LTAP01374 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LTAP01374 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LTAP01374 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LTAP01374 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LTAP01374 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LTAP01374 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LTAP01374 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LTAP01374 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.84■□□□□ 0.61
LTAP01374 AC093323.1-202ENST00000635031 2045 ntBASIC18.83■□□□□ 0.61
LTAP01374 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.83■□□□□ 0.6
LTAP01374 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.83■□□□□ 0.6
LTAP01374 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
LTAP01374 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LTAP01374 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.82■□□□□ 0.6
LTAP01374 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LTAP01374 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
LTAP01374 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTAP01374 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LTAP01374 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTAP01374 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LTAP01374 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.81■□□□□ 0.6
LTAP01374 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTAP01374 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.81■□□□□ 0.6
LTAP01374 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.81■□□□□ 0.6
LTAP01374 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LTAP01374 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.8■□□□□ 0.6
LTAP01374 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LTAP01374 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LTAP01374 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.79■□□□□ 0.6
LTAP01374 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LTAP01374 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LTAP01374 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LTAP01374 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LTAP01374 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LTAP01374 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LTAP01374 AC135983.2-203ENST00000454486 1613 ntBASIC18.78■□□□□ 0.6
LTAP01374 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LTAP01374 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.78■□□□□ 0.6
LTAP01374 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.78■□□□□ 0.6
LTAP01374 SETD8P1-201ENST00000623146 1180 ntBASIC18.78■□□□□ 0.6
LTAP01374 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LTAP01374 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LTAP01374 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LTAP01374 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LTAP01374 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LTAP01374 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms