Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDGFBP01127 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.98■■□□□ 1.75
PDGFBP01127 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.98■■□□□ 1.75
PDGFBP01127 BHLHE23-202ENST00000612929 1109 ntBASIC25.97■■□□□ 1.75
PDGFBP01127 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PDGFBP01127 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PDGFBP01127 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.96■■□□□ 1.75
PDGFBP01127 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PDGFBP01127 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.96■■□□□ 1.75
PDGFBP01127 DUX4L9-201ENST00000449051 1259 ntBASIC25.95■■□□□ 1.74
PDGFBP01127 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
PDGFBP01127 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDGFBP01127 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.95■■□□□ 1.74
PDGFBP01127 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDGFBP01127 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDGFBP01127 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDGFBP01127 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.94■■□□□ 1.74
PDGFBP01127 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
PDGFBP01127 RP9P-202ENST00000450133 1212 ntBASIC25.94■■□□□ 1.74
PDGFBP01127 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PDGFBP01127 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PDGFBP01127 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.93■■□□□ 1.74
PDGFBP01127 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.93■■□□□ 1.74
PDGFBP01127 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PDGFBP01127 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.92■■□□□ 1.74
PDGFBP01127 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PDGFBP01127 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PDGFBP01127 GUSBP5-201ENST00000418136 578 ntBASIC25.92■■□□□ 1.74
PDGFBP01127 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDGFBP01127 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDGFBP01127 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PDGFBP01127 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
PDGFBP01127 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDGFBP01127 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PDGFBP01127 AC026202.3-201ENST00000600805 1127 ntBASIC25.9■■□□□ 1.74
PDGFBP01127 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PDGFBP01127 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDGFBP01127 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.89■■□□□ 1.74
PDGFBP01127 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PDGFBP01127 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.89■■□□□ 1.74
PDGFBP01127 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PDGFBP01127 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
PDGFBP01127 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.88■■□□□ 1.73
PDGFBP01127 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.88■■□□□ 1.73
PDGFBP01127 AC103834.1-201ENST00000520383 144 ntBASIC25.88■■□□□ 1.73
PDGFBP01127 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDGFBP01127 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDGFBP01127 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDGFBP01127 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDGFBP01127 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDGFBP01127 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.86■■□□□ 1.73
PDGFBP01127 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDGFBP01127 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.86■■□□□ 1.73
PDGFBP01127 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDGFBP01127 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.86■■□□□ 1.73
PDGFBP01127 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDGFBP01127 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PDGFBP01127 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.85■■□□□ 1.73
PDGFBP01127 SPCS2P3-201ENST00000500401 656 ntBASIC25.85■■□□□ 1.73
PDGFBP01127 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PDGFBP01127 SMPD5-203ENST00000639008 1464 ntBASIC25.85■■□□□ 1.73
PDGFBP01127 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDGFBP01127 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDGFBP01127 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDGFBP01127 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
PDGFBP01127 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.83■■□□□ 1.73
PDGFBP01127 YBX1P4-201ENST00000392794 808 ntBASIC25.82■■□□□ 1.72
PDGFBP01127 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PDGFBP01127 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.81■■□□□ 1.72
PDGFBP01127 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
PDGFBP01127 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.81■■□□□ 1.72
PDGFBP01127 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.81■■□□□ 1.72
PDGFBP01127 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
PDGFBP01127 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
PDGFBP01127 PVT1_1.1-201ENST00000615125 194 ntBASIC25.81■■□□□ 1.72
PDGFBP01127 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PDGFBP01127 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDGFBP01127 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDGFBP01127 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PDGFBP01127 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.8■■□□□ 1.72
PDGFBP01127 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDGFBP01127 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.8■■□□□ 1.72
PDGFBP01127 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
PDGFBP01127 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.8■■□□□ 1.72
PDGFBP01127 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.8■■□□□ 1.72
PDGFBP01127 AC074183.2-201ENST00000623112 922 ntBASIC25.79■■□□□ 1.72
PDGFBP01127 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDGFBP01127 AL356441.2-201ENST00000443009 864 ntBASIC25.78■■□□□ 1.72
PDGFBP01127 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDGFBP01127 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.78■■□□□ 1.72
PDGFBP01127 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
PDGFBP01127 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDGFBP01127 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
PDGFBP01127 AC139795.1-202ENST00000500444 432 ntBASIC25.77■■□□□ 1.72
PDGFBP01127 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.77■■□□□ 1.72
PDGFBP01127 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDGFBP01127 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDGFBP01127 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.76■■□□□ 1.71
PDGFBP01127 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.76■■□□□ 1.71
PDGFBP01127 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms