Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SIX6O95475 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SIX6O95475 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIX6O95475 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIX6O95475 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SIX6O95475 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIX6O95475 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIX6O95475 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.98■□□□□ 0.95
SIX6O95475 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIX6O95475 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIX6O95475 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIX6O95475 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIX6O95475 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIX6O95475 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SIX6O95475 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIX6O95475 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIX6O95475 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIX6O95475 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SIX6O95475 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.96■□□□□ 0.95
SIX6O95475 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIX6O95475 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.96■□□□□ 0.95
SIX6O95475 WASH5P-204ENST00000632292 975 ntBASIC20.96■□□□□ 0.95
SIX6O95475 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIX6O95475 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SIX6O95475 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.95■□□□□ 0.95
SIX6O95475 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX6O95475 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.95■□□□□ 0.94
SIX6O95475 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX6O95475 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX6O95475 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX6O95475 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIX6O95475 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.94■□□□□ 0.94
SIX6O95475 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX6O95475 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX6O95475 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SIX6O95475 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIX6O95475 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SIX6O95475 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.93■□□□□ 0.94
SIX6O95475 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
SIX6O95475 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.92■□□□□ 0.94
SIX6O95475 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX6O95475 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX6O95475 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIX6O95475 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIX6O95475 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SIX6O95475 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIX6O95475 DYNLL1-208ENST00000550178 581 ntBASIC20.91■□□□□ 0.94
SIX6O95475 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SIX6O95475 AC100797.4-201ENST00000631653 1827 ntBASIC20.91■□□□□ 0.94
SIX6O95475 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SIX6O95475 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SIX6O95475 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.9■□□□□ 0.94
SIX6O95475 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.9■□□□□ 0.94
SIX6O95475 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SIX6O95475 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIX6O95475 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIX6O95475 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SIX6O95475 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SIX6O95475 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SIX6O95475 DUSP8P4-201ENST00000399538 1761 ntBASIC20.89■□□□□ 0.93
SIX6O95475 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SIX6O95475 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.89■□□□□ 0.93
SIX6O95475 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.88■□□□□ 0.93
SIX6O95475 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIX6O95475 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIX6O95475 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIX6O95475 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIX6O95475 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIX6O95475 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.87■□□□□ 0.93
SIX6O95475 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.87■□□□□ 0.93
SIX6O95475 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX6O95475 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX6O95475 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIX6O95475 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SIX6O95475 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SIX6O95475 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX6O95475 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX6O95475 AC092803.2-201ENST00000564287 1899 ntBASIC20.85■□□□□ 0.93
SIX6O95475 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.85■□□□□ 0.93
SIX6O95475 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX6O95475 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX6O95475 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX6O95475 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.84■□□□□ 0.93
SIX6O95475 AC006077.2-201ENST00000623591 457 ntBASIC20.84■□□□□ 0.93
SIX6O95475 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX6O95475 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX6O95475 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX6O95475 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX6O95475 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SIX6O95475 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX6O95475 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.83■□□□□ 0.92
SIX6O95475 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SIX6O95475 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIX6O95475 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SIX6O95475 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIX6O95475 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIX6O95475 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.82■□□□□ 0.92
SIX6O95475 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX6O95475 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX6O95475 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms