Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
SMC2O95347 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
SMC2O95347 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SMC2O95347 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.25■■■□□ 2.11
SMC2O95347 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SMC2O95347 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
SMC2O95347 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.24■■■□□ 2.11
SMC2O95347 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SMC2O95347 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SMC2O95347 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.22■■■□□ 2.11
SMC2O95347 AC087741.3-201ENST00000624270 1347 ntBASIC28.22■■■□□ 2.11
SMC2O95347 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SMC2O95347 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.22■■■□□ 2.11
SMC2O95347 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.22■■■□□ 2.11
SMC2O95347 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SMC2O95347 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SMC2O95347 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.22■■■□□ 2.11
SMC2O95347 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SMC2O95347 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SMC2O95347 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.21■■■□□ 2.11
SMC2O95347 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
SMC2O95347 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SMC2O95347 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
SMC2O95347 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.1
SMC2O95347 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SMC2O95347 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.2■■■□□ 2.1
SMC2O95347 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.2■■■□□ 2.1
SMC2O95347 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.2■■■□□ 2.1
SMC2O95347 AC135731.1-201ENST00000569415 2548 ntBASIC28.2■■■□□ 2.1
SMC2O95347 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.19■■■□□ 2.1
SMC2O95347 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMC2O95347 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.19■■■□□ 2.1
SMC2O95347 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMC2O95347 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SMC2O95347 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SMC2O95347 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SMC2O95347 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
SMC2O95347 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SMC2O95347 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
SMC2O95347 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMC2O95347 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMC2O95347 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.17■■■□□ 2.1
SMC2O95347 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.17■■■□□ 2.1
SMC2O95347 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SMC2O95347 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.16■■■□□ 2.1
SMC2O95347 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMC2O95347 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMC2O95347 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.14■■■□□ 2.1
SMC2O95347 AL162393.1-201ENST00000437852 946 ntBASIC28.14■■■□□ 2.1
SMC2O95347 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SMC2O95347 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.09
SMC2O95347 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.09
SMC2O95347 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SMC2O95347 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
SMC2O95347 AC044849.2-201ENST00000606596 710 ntBASIC28.13■■■□□ 2.09
SMC2O95347 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
SMC2O95347 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
SMC2O95347 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.12■■■□□ 2.09
SMC2O95347 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
SMC2O95347 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SMC2O95347 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMC2O95347 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMC2O95347 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMC2O95347 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.1■■■□□ 2.09
SMC2O95347 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
SMC2O95347 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SMC2O95347 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.1■■■□□ 2.09
SMC2O95347 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
SMC2O95347 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SMC2O95347 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
SMC2O95347 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.09■■■□□ 2.09
SMC2O95347 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SMC2O95347 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.09■■■□□ 2.09
SMC2O95347 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.08■■■□□ 2.09
SMC2O95347 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SMC2O95347 AL449106.1-201ENST00000608517 1980 ntBASIC28.08■■■□□ 2.09
SMC2O95347 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SMC2O95347 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
SMC2O95347 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.08■■■□□ 2.09
SMC2O95347 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
SMC2O95347 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SMC2O95347 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
SMC2O95347 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.07■■■□□ 2.08
SMC2O95347 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMC2O95347 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMC2O95347 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.06■■■□□ 2.08
SMC2O95347 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMC2O95347 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMC2O95347 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMC2O95347 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.06■■■□□ 2.08
SMC2O95347 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SMC2O95347 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.06■■■□□ 2.08
SMC2O95347 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SMC2O95347 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SMC2O95347 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SMC2O95347 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
SMC2O95347 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
SMC2O95347 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SMC2O95347 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.03■■■□□ 2.08
SMC2O95347 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms