Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Tom1O88746 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC32.04■■■□□ 2.72
Tom1O88746 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC32.04■■■□□ 2.72
Tom1O88746 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Tom1O88746 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Tom1O88746 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Tom1O88746 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Tom1O88746 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Tom1O88746 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Tom1O88746 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Tom1O88746 Nsd1-203ENSMUST00000224156 1149 ntBASIC32.02■■■□□ 2.72
Tom1O88746 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Tom1O88746 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
Tom1O88746 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Tom1O88746 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Tom1O88746 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
Tom1O88746 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Tom1O88746 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Tom1O88746 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.96■■■□□ 2.71
Tom1O88746 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Tom1O88746 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC31.96■■■□□ 2.71
Tom1O88746 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Tom1O88746 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Tom1O88746 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC31.95■■■□□ 2.71
Tom1O88746 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC31.95■■■□□ 2.71
Tom1O88746 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Tom1O88746 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Tom1O88746 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
Tom1O88746 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Tom1O88746 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC31.93■■■□□ 2.7
Tom1O88746 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Tom1O88746 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Tom1O88746 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Tom1O88746 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.91■■■□□ 2.7
Tom1O88746 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Tom1O88746 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Tom1O88746 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Tom1O88746 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Tom1O88746 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Tom1O88746 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Tom1O88746 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
Tom1O88746 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Tom1O88746 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
Tom1O88746 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Tom1O88746 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
Tom1O88746 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Tom1O88746 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Tom1O88746 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Tom1O88746 Gm18755-201ENSMUST00000218030 1099 ntBASIC31.86■■■□□ 2.69
Tom1O88746 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Tom1O88746 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Tom1O88746 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC31.82■■■□□ 2.68
Tom1O88746 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Tom1O88746 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
Tom1O88746 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC31.8■■■□□ 2.68
Tom1O88746 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC31.8■■■□□ 2.68
Tom1O88746 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Tom1O88746 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Tom1O88746 Terc-201ENSMUST00000082862 423 ntBASIC31.8■■■□□ 2.68
Tom1O88746 Gm43592-201ENSMUST00000196922 1165 ntBASIC31.77■■■□□ 2.68
Tom1O88746 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Tom1O88746 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Tom1O88746 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.75■■■□□ 2.67
Tom1O88746 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Tom1O88746 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Tom1O88746 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Tom1O88746 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC31.74■■■□□ 2.67
Tom1O88746 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC31.74■■■□□ 2.67
Tom1O88746 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC31.74■■■□□ 2.67
Tom1O88746 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Tom1O88746 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Tom1O88746 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Tom1O88746 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Tom1O88746 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Tom1O88746 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Tom1O88746 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Tom1O88746 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Tom1O88746 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Tom1O88746 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Tom1O88746 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Tom1O88746 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Tom1O88746 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Tom1O88746 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Tom1O88746 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Tom1O88746 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Tom1O88746 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
Tom1O88746 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Tom1O88746 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
Tom1O88746 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Tom1O88746 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC31.65■■■□□ 2.66
Tom1O88746 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Tom1O88746 Gm44428-201ENSMUST00000204474 874 ntBASIC31.64■■■□□ 2.66
Tom1O88746 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Tom1O88746 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Tom1O88746 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Tom1O88746 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC31.63■■■□□ 2.65
Tom1O88746 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Tom1O88746 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Tom1O88746 Etf1-202ENSMUST00000180351 108 ntBASIC31.62■■■□□ 2.65
Tom1O88746 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC31.61■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms