Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cldn1O88551 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn1O88551 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn1O88551 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn1O88551 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn1O88551 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.63■□□□□ 0.73
Cldn1O88551 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn1O88551 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.63■□□□□ 0.73
Cldn1O88551 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn1O88551 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn1O88551 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn1O88551 Gm15546-201ENSMUST00000122095 826 ntBASIC19.62■□□□□ 0.73
Cldn1O88551 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cldn1O88551 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cldn1O88551 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn1O88551 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cldn1O88551 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.61■□□□□ 0.73
Cldn1O88551 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn1O88551 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn1O88551 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn1O88551 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn1O88551 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn1O88551 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn1O88551 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn1O88551 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn1O88551 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cldn1O88551 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.59■□□□□ 0.73
Cldn1O88551 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn1O88551 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.58■□□□□ 0.72
Cldn1O88551 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn1O88551 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn1O88551 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn1O88551 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn1O88551 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.57■□□□□ 0.72
Cldn1O88551 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn1O88551 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.56■□□□□ 0.72
Cldn1O88551 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn1O88551 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cldn1O88551 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn1O88551 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn1O88551 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.54■□□□□ 0.72
Cldn1O88551 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn1O88551 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn1O88551 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.54■□□□□ 0.72
Cldn1O88551 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn1O88551 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.53■□□□□ 0.72
Cldn1O88551 Gm9812-201ENSMUST00000061934 968 ntBASIC19.53■□□□□ 0.72
Cldn1O88551 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn1O88551 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn1O88551 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn1O88551 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn1O88551 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn1O88551 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn1O88551 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.52■□□□□ 0.72
Cldn1O88551 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.52■□□□□ 0.71
Cldn1O88551 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cldn1O88551 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn1O88551 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn1O88551 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.51■□□□□ 0.71
Cldn1O88551 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.51■□□□□ 0.71
Cldn1O88551 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn1O88551 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn1O88551 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn1O88551 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.5■□□□□ 0.71
Cldn1O88551 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn1O88551 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn1O88551 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cldn1O88551 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn1O88551 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cldn1O88551 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn1O88551 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cldn1O88551 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.49■□□□□ 0.71
Cldn1O88551 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cldn1O88551 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn1O88551 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cldn1O88551 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn1O88551 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.48■□□□□ 0.71
Cldn1O88551 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn1O88551 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn1O88551 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn1O88551 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.47■□□□□ 0.71
Cldn1O88551 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn1O88551 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.47■□□□□ 0.71
Cldn1O88551 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Cldn1O88551 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn1O88551 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.46■□□□□ 0.71
Cldn1O88551 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn1O88551 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cldn1O88551 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Cldn1O88551 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn1O88551 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cldn1O88551 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.45■□□□□ 0.7
Cldn1O88551 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn1O88551 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn1O88551 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn1O88551 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn1O88551 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.44■□□□□ 0.7
Cldn1O88551 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn1O88551 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn1O88551 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 380.1 ms