Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.33■■□□□ 1.49
SNRNP200O75643 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNRNP200O75643 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNRNP200O75643 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNRNP200O75643 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRNP200O75643 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRNP200O75643 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRNP200O75643 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRNP200O75643 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRNP200O75643 AC018358.1-201ENST00000631079 1402 ntBASIC24.31■■□□□ 1.48
SNRNP200O75643 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.31■■□□□ 1.48
SNRNP200O75643 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SNRNP200O75643 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SNRNP200O75643 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
SNRNP200O75643 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRNP200O75643 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SNRNP200O75643 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRNP200O75643 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SNRNP200O75643 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRNP200O75643 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.28■■□□□ 1.48
SNRNP200O75643 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNRNP200O75643 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
SNRNP200O75643 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNRNP200O75643 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNRNP200O75643 MIR219A2-201ENST00000608502 1504 ntBASIC24.27■■□□□ 1.48
SNRNP200O75643 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNRNP200O75643 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNRNP200O75643 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.26■■□□□ 1.47
SNRNP200O75643 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNRNP200O75643 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNRNP200O75643 AC008813.1-201ENST00000536597 885 ntBASIC24.25■■□□□ 1.47
SNRNP200O75643 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SNRNP200O75643 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNRNP200O75643 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.25■■□□□ 1.47
SNRNP200O75643 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNRNP200O75643 LINC01003-201ENST00000564834 1764 ntBASIC24.24■■□□□ 1.47
SNRNP200O75643 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNRNP200O75643 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SNRNP200O75643 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SNRNP200O75643 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SNRNP200O75643 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SNRNP200O75643 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.23■■□□□ 1.47
SNRNP200O75643 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
SNRNP200O75643 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SNRNP200O75643 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.22■■□□□ 1.47
SNRNP200O75643 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SNRNP200O75643 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.21■■□□□ 1.47
SNRNP200O75643 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SNRNP200O75643 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.21■■□□□ 1.47
SNRNP200O75643 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
SNRNP200O75643 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SNRNP200O75643 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SNRNP200O75643 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.19■■□□□ 1.46
SNRNP200O75643 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.19■■□□□ 1.46
SNRNP200O75643 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SNRNP200O75643 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SNRNP200O75643 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SNRNP200O75643 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
SNRNP200O75643 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.18■■□□□ 1.46
SNRNP200O75643 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SNRNP200O75643 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNRNP200O75643 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNRNP200O75643 AC060814.1-201ENST00000554326 538 ntBASIC24.17■■□□□ 1.46
SNRNP200O75643 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.17■■□□□ 1.46
SNRNP200O75643 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNRNP200O75643 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNRNP200O75643 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNRNP200O75643 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.15■■□□□ 1.46
SNRNP200O75643 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.15■■□□□ 1.46
SNRNP200O75643 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNRNP200O75643 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNRNP200O75643 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.14■■□□□ 1.46
SNRNP200O75643 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.14■■□□□ 1.46
SNRNP200O75643 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.14■■□□□ 1.46
SNRNP200O75643 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SNRNP200O75643 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.14■■□□□ 1.45
SNRNP200O75643 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SNRNP200O75643 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.14■■□□□ 1.45
SNRNP200O75643 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SNRNP200O75643 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SNRNP200O75643 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
SNRNP200O75643 HSD17B1P1-201ENST00000590052 955 ntBASIC24.13■■□□□ 1.45
SNRNP200O75643 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNRNP200O75643 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNRNP200O75643 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNRNP200O75643 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms