Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.35■■□□□ 1.01
SSX5O60225 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SSX5O60225 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
SSX5O60225 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.34■■□□□ 1.01
SSX5O60225 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.34■■□□□ 1.01
SSX5O60225 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SSX5O60225 CAHM-201ENST00000604200 896 ntBASIC21.33■■□□□ 1.01
SSX5O60225 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SSX5O60225 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SSX5O60225 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.33■■□□□ 1
SSX5O60225 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SSX5O60225 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.32■■□□□ 1
SSX5O60225 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.32■■□□□ 1
SSX5O60225 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.32■■□□□ 1
SSX5O60225 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.32■■□□□ 1
SSX5O60225 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SSX5O60225 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SSX5O60225 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.32■■□□□ 1
SSX5O60225 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SSX5O60225 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSX5O60225 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SSX5O60225 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.31■■□□□ 1
SSX5O60225 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.31■■□□□ 1
SSX5O60225 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSX5O60225 AC018358.1-201ENST00000631079 1402 ntBASIC21.3■■□□□ 1
SSX5O60225 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSX5O60225 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SSX5O60225 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.3■■□□□ 1
SSX5O60225 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.3■■□□□ 1
SSX5O60225 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.29■■□□□ 1
SSX5O60225 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SSX5O60225 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SSX5O60225 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SSX5O60225 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SSX5O60225 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSX5O60225 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SSX5O60225 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SSX5O60225 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSX5O60225 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SSX5O60225 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.27■■□□□ 1
SSX5O60225 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SSX5O60225 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSX5O60225 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SSX5O60225 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
SSX5O60225 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.27■□□□□ 0.99
SSX5O60225 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.26■□□□□ 0.99
SSX5O60225 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSX5O60225 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSX5O60225 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSX5O60225 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSX5O60225 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SSX5O60225 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SSX5O60225 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSX5O60225 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSX5O60225 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.23■□□□□ 0.99
SSX5O60225 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.23■□□□□ 0.99
SSX5O60225 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.23■□□□□ 0.99
SSX5O60225 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.23■□□□□ 0.99
SSX5O60225 AC145676.1-201ENST00000514988 2004 ntBASIC21.22■□□□□ 0.99
SSX5O60225 AC135983.2-203ENST00000454486 1613 ntBASIC21.22■□□□□ 0.99
SSX5O60225 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SSX5O60225 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.22■□□□□ 0.99
SSX5O60225 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSX5O60225 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SSX5O60225 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SSX5O60225 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.2■□□□□ 0.98
SSX5O60225 AC136428.2-201ENST00000563187 214 ntBASIC21.2■□□□□ 0.98
SSX5O60225 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SSX5O60225 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SSX5O60225 AC020928.2-201ENST00000588717 2197 ntBASIC21.2■□□□□ 0.98
SSX5O60225 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSX5O60225 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.2■□□□□ 0.98
SSX5O60225 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SSX5O60225 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX5O60225 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.19■□□□□ 0.98
SSX5O60225 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SSX5O60225 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX5O60225 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSX5O60225 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SSX5O60225 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.18■□□□□ 0.98
SSX5O60225 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.18■□□□□ 0.98
SSX5O60225 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX5O60225 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SSX5O60225 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.17■□□□□ 0.98
SSX5O60225 WHAMMP2-203ENST00000563942 1603 ntBASIC21.17■□□□□ 0.98
SSX5O60225 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.17■□□□□ 0.98
SSX5O60225 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX5O60225 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX5O60225 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SSX5O60225 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSX5O60225 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX5O60225 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms