Protein–RNA interactions for Protein: O55225

Otog, Otogelin, mousemouse

Predictions only

Length 2,910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtogO55225 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OtogO55225 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.19■□□□□ 0.66
OtogO55225 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
OtogO55225 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OtogO55225 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.19■□□□□ 0.66
OtogO55225 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OtogO55225 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OtogO55225 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.18■□□□□ 0.66
OtogO55225 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.18■□□□□ 0.66
OtogO55225 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
OtogO55225 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.18■□□□□ 0.66
OtogO55225 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
OtogO55225 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.17■□□□□ 0.66
OtogO55225 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OtogO55225 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OtogO55225 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
OtogO55225 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
OtogO55225 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OtogO55225 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OtogO55225 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
OtogO55225 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
OtogO55225 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
OtogO55225 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
OtogO55225 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
OtogO55225 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
OtogO55225 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
OtogO55225 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
OtogO55225 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
OtogO55225 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
OtogO55225 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
OtogO55225 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OtogO55225 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
OtogO55225 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
OtogO55225 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.1■□□□□ 0.65
OtogO55225 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OtogO55225 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
OtogO55225 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.1■□□□□ 0.65
OtogO55225 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OtogO55225 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.09■□□□□ 0.65
OtogO55225 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OtogO55225 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OtogO55225 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.08■□□□□ 0.65
OtogO55225 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OtogO55225 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
OtogO55225 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
OtogO55225 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
OtogO55225 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
OtogO55225 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.06■□□□□ 0.64
OtogO55225 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.05■□□□□ 0.64
OtogO55225 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
OtogO55225 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OtogO55225 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OtogO55225 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
OtogO55225 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OtogO55225 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
OtogO55225 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OtogO55225 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OtogO55225 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
OtogO55225 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.02■□□□□ 0.64
OtogO55225 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.02■□□□□ 0.64
OtogO55225 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OtogO55225 Gm13238-201ENSMUST00000117655 780 ntBASIC19.01■□□□□ 0.63
OtogO55225 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.01■□□□□ 0.63
OtogO55225 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
OtogO55225 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OtogO55225 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OtogO55225 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
OtogO55225 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OtogO55225 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19■□□□□ 0.63
OtogO55225 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19■□□□□ 0.63
OtogO55225 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
OtogO55225 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
OtogO55225 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19■□□□□ 0.63
OtogO55225 Gm14117-201ENSMUST00000122417 843 ntBASIC18.99■□□□□ 0.63
OtogO55225 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
OtogO55225 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
OtogO55225 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
OtogO55225 Gm45102-201ENSMUST00000207427 857 ntBASIC18.98■□□□□ 0.63
OtogO55225 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.97■□□□□ 0.63
OtogO55225 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
OtogO55225 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OtogO55225 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
OtogO55225 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.97■□□□□ 0.63
OtogO55225 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OtogO55225 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OtogO55225 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OtogO55225 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
OtogO55225 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.96■□□□□ 0.63
OtogO55225 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
OtogO55225 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
OtogO55225 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
OtogO55225 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OtogO55225 Rps24-207ENSMUST00000224568 714 ntBASIC18.94■□□□□ 0.62
OtogO55225 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
OtogO55225 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
OtogO55225 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.94■□□□□ 0.62
OtogO55225 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
OtogO55225 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
OtogO55225 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
OtogO55225 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms