Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaO55042 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SncaO55042 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SncaO55042 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SncaO55042 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SncaO55042 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SncaO55042 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SncaO55042 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SncaO55042 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.88■□□□□ 0.61
SncaO55042 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.88■□□□□ 0.61
SncaO55042 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SncaO55042 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SncaO55042 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SncaO55042 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
SncaO55042 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SncaO55042 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SncaO55042 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SncaO55042 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SncaO55042 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SncaO55042 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaO55042 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaO55042 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaO55042 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SncaO55042 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SncaO55042 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SncaO55042 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaO55042 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaO55042 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SncaO55042 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SncaO55042 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.84■□□□□ 0.61
SncaO55042 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SncaO55042 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SncaO55042 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
SncaO55042 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SncaO55042 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SncaO55042 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SncaO55042 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SncaO55042 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SncaO55042 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SncaO55042 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SncaO55042 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SncaO55042 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SncaO55042 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SncaO55042 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SncaO55042 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SncaO55042 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SncaO55042 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SncaO55042 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SncaO55042 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SncaO55042 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SncaO55042 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SncaO55042 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SncaO55042 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.78■□□□□ 0.6
SncaO55042 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SncaO55042 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SncaO55042 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SncaO55042 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SncaO55042 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SncaO55042 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SncaO55042 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SncaO55042 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SncaO55042 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SncaO55042 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SncaO55042 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SncaO55042 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SncaO55042 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SncaO55042 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SncaO55042 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SncaO55042 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SncaO55042 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SncaO55042 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SncaO55042 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SncaO55042 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SncaO55042 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SncaO55042 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SncaO55042 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SncaO55042 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SncaO55042 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SncaO55042 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SncaO55042 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SncaO55042 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SncaO55042 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SncaO55042 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SncaO55042 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SncaO55042 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SncaO55042 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.72■□□□□ 0.59
SncaO55042 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SncaO55042 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SncaO55042 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.71■□□□□ 0.59
SncaO55042 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SncaO55042 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SncaO55042 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SncaO55042 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SncaO55042 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SncaO55042 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SncaO55042 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
SncaO55042 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SncaO55042 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SncaO55042 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SncaO55042 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms