Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DffbO54788 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.6■□□□□ 0.73
DffbO54788 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DffbO54788 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DffbO54788 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DffbO54788 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DffbO54788 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DffbO54788 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DffbO54788 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DffbO54788 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DffbO54788 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DffbO54788 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
DffbO54788 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DffbO54788 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DffbO54788 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DffbO54788 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DffbO54788 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DffbO54788 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DffbO54788 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DffbO54788 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DffbO54788 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DffbO54788 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DffbO54788 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DffbO54788 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DffbO54788 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
DffbO54788 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
DffbO54788 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DffbO54788 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DffbO54788 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DffbO54788 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DffbO54788 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DffbO54788 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
DffbO54788 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.53■□□□□ 0.72
DffbO54788 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
DffbO54788 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DffbO54788 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
DffbO54788 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DffbO54788 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DffbO54788 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.52■□□□□ 0.72
DffbO54788 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
DffbO54788 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
DffbO54788 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
DffbO54788 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DffbO54788 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
DffbO54788 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
DffbO54788 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DffbO54788 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.51■□□□□ 0.71
DffbO54788 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DffbO54788 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DffbO54788 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DffbO54788 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.5■□□□□ 0.71
DffbO54788 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DffbO54788 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.5■□□□□ 0.71
DffbO54788 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DffbO54788 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.5■□□□□ 0.71
DffbO54788 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DffbO54788 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
DffbO54788 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
DffbO54788 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DffbO54788 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DffbO54788 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DffbO54788 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DffbO54788 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DffbO54788 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.48■□□□□ 0.71
DffbO54788 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DffbO54788 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DffbO54788 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DffbO54788 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DffbO54788 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DffbO54788 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
DffbO54788 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.47■□□□□ 0.71
DffbO54788 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DffbO54788 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
DffbO54788 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DffbO54788 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DffbO54788 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DffbO54788 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.46■□□□□ 0.71
DffbO54788 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DffbO54788 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.46■□□□□ 0.71
DffbO54788 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
DffbO54788 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
DffbO54788 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DffbO54788 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DffbO54788 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
DffbO54788 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DffbO54788 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
DffbO54788 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DffbO54788 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DffbO54788 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DffbO54788 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
DffbO54788 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.44■□□□□ 0.7
DffbO54788 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.43■□□□□ 0.7
DffbO54788 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
DffbO54788 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DffbO54788 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
DffbO54788 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DffbO54788 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DffbO54788 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DffbO54788 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DffbO54788 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 143.7 ms