Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Gm7332-201ENSMUST00000118351 454 ntBASIC23.7■■□□□ 1.38
Ptch2O35595 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Ptch2O35595 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Ptch2O35595 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptch2O35595 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.69■■□□□ 1.38
Ptch2O35595 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ptch2O35595 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ptch2O35595 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptch2O35595 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.68■■□□□ 1.38
Ptch2O35595 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch2O35595 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch2O35595 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch2O35595 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch2O35595 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch2O35595 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch2O35595 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch2O35595 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.67■■□□□ 1.38
Ptch2O35595 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch2O35595 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch2O35595 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch2O35595 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch2O35595 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.67■■□□□ 1.38
Ptch2O35595 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.67■■□□□ 1.38
Ptch2O35595 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch2O35595 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.66■■□□□ 1.38
Ptch2O35595 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch2O35595 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch2O35595 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch2O35595 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ptch2O35595 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ptch2O35595 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.65■■□□□ 1.38
Ptch2O35595 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptch2O35595 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptch2O35595 Gm14523-201ENSMUST00000117260 558 ntBASIC23.64■■□□□ 1.37
Ptch2O35595 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ptch2O35595 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ptch2O35595 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch2O35595 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.61■■□□□ 1.37
Ptch2O35595 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch2O35595 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptch2O35595 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch2O35595 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch2O35595 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch2O35595 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.58■■□□□ 1.37
Ptch2O35595 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ptch2O35595 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.58■■□□□ 1.37
Ptch2O35595 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch2O35595 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch2O35595 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ptch2O35595 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Ptch2O35595 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptch2O35595 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptch2O35595 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Ptch2O35595 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.54■■□□□ 1.36
Ptch2O35595 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.54■■□□□ 1.36
Ptch2O35595 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptch2O35595 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ptch2O35595 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Ptch2O35595 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Ptch2O35595 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.53■■□□□ 1.36
Ptch2O35595 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.53■■□□□ 1.36
Ptch2O35595 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.53■■□□□ 1.36
Ptch2O35595 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch2O35595 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch2O35595 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ptch2O35595 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptch2O35595 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptch2O35595 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.52■■□□□ 1.36
Ptch2O35595 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ptch2O35595 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.51■■□□□ 1.35
Ptch2O35595 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ptch2O35595 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ptch2O35595 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Ptch2O35595 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.5■■□□□ 1.35
Ptch2O35595 Terc-201ENSMUST00000082862 423 ntBASIC23.5■■□□□ 1.35
Ptch2O35595 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ptch2O35595 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Ptch2O35595 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ptch2O35595 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Ptch2O35595 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ptch2O35595 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.48■■□□□ 1.35
Ptch2O35595 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ptch2O35595 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Ptch2O35595 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ptch2O35595 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ptch2O35595 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ptch2O35595 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ptch2O35595 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ptch2O35595 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ptch2O35595 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.46■■□□□ 1.35
Ptch2O35595 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.46■■□□□ 1.35
Ptch2O35595 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.46■■□□□ 1.35
Ptch2O35595 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ptch2O35595 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ptch2O35595 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Ptch2O35595 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ptch2O35595 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptch2O35595 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ptch2O35595 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ptch2O35595 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms