Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gfra3O35118 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gfra3O35118 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Gfra3O35118 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gfra3O35118 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gfra3O35118 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gfra3O35118 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gfra3O35118 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gfra3O35118 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gfra3O35118 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gfra3O35118 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Gfra3O35118 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gfra3O35118 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gfra3O35118 Gm16437-201ENSMUST00000025669 507 ntBASIC19.81■□□□□ 0.76
Gfra3O35118 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gfra3O35118 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gfra3O35118 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gfra3O35118 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gfra3O35118 Gm11687-201ENSMUST00000118911 886 ntBASIC19.8■□□□□ 0.76
Gfra3O35118 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gfra3O35118 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.8■□□□□ 0.76
Gfra3O35118 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.8■□□□□ 0.76
Gfra3O35118 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gfra3O35118 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.8■□□□□ 0.76
Gfra3O35118 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gfra3O35118 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gfra3O35118 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gfra3O35118 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gfra3O35118 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.79■□□□□ 0.76
Gfra3O35118 Gm9812-201ENSMUST00000061934 968 ntBASIC19.79■□□□□ 0.76
Gfra3O35118 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gfra3O35118 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gfra3O35118 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gfra3O35118 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Gfra3O35118 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Gfra3O35118 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gfra3O35118 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gfra3O35118 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gfra3O35118 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gfra3O35118 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gfra3O35118 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gfra3O35118 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gfra3O35118 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Gfra3O35118 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gfra3O35118 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.72■□□□□ 0.75
Gfra3O35118 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gfra3O35118 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gfra3O35118 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Gfra3O35118 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gfra3O35118 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.71■□□□□ 0.75
Gfra3O35118 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gfra3O35118 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gfra3O35118 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Gfra3O35118 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Gfra3O35118 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.7■□□□□ 0.74
Gfra3O35118 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gfra3O35118 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gfra3O35118 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gfra3O35118 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.69■□□□□ 0.74
Gfra3O35118 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gfra3O35118 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gfra3O35118 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.69■□□□□ 0.74
Gfra3O35118 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gfra3O35118 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gfra3O35118 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gfra3O35118 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gfra3O35118 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.68■□□□□ 0.74
Gfra3O35118 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.68■□□□□ 0.74
Gfra3O35118 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gfra3O35118 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Gfra3O35118 Cap2-205ENSMUST00000225824 1634 ntBASIC19.67■□□□□ 0.74
Gfra3O35118 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gfra3O35118 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gfra3O35118 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.67■□□□□ 0.74
Gfra3O35118 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gfra3O35118 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Gfra3O35118 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gfra3O35118 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gfra3O35118 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gfra3O35118 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gfra3O35118 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gfra3O35118 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Gfra3O35118 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gfra3O35118 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.66■□□□□ 0.74
Gfra3O35118 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gfra3O35118 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.65■□□□□ 0.74
Gfra3O35118 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gfra3O35118 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gfra3O35118 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gfra3O35118 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gfra3O35118 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.64■□□□□ 0.73
Gfra3O35118 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gfra3O35118 Terc-201ENSMUST00000082862 423 ntBASIC19.64■□□□□ 0.73
Gfra3O35118 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gfra3O35118 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gfra3O35118 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gfra3O35118 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Gfra3O35118 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gfra3O35118 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gfra3O35118 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms