Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
RNF113AO15541 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
RNF113AO15541 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.47■■■□□ 2.47
RNF113AO15541 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RNF113AO15541 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
RNF113AO15541 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
RNF113AO15541 MIR4449-201ENST00000578365 66 ntBASIC30.44■■■□□ 2.46
RNF113AO15541 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.44■■■□□ 2.46
RNF113AO15541 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.43■■■□□ 2.46
RNF113AO15541 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
RNF113AO15541 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.43■■■□□ 2.46
RNF113AO15541 AC142086.6-201ENST00000621154 1765 ntBASIC30.43■■■□□ 2.46
RNF113AO15541 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
RNF113AO15541 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
RNF113AO15541 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.42■■■□□ 2.46
RNF113AO15541 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
RNF113AO15541 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
RNF113AO15541 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
RNF113AO15541 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RNF113AO15541 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.41■■■□□ 2.46
RNF113AO15541 AC018358.1-201ENST00000631079 1402 ntBASIC30.41■■■□□ 2.46
RNF113AO15541 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
RNF113AO15541 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
RNF113AO15541 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
RNF113AO15541 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.4■■■□□ 2.46
RNF113AO15541 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.4■■■□□ 2.46
RNF113AO15541 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
RNF113AO15541 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.39■■■□□ 2.46
RNF113AO15541 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
RNF113AO15541 AC148477.6-201ENST00000623746 465 ntBASIC30.39■■■□□ 2.46
RNF113AO15541 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.38■■■□□ 2.45
RNF113AO15541 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
RNF113AO15541 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.37■■■□□ 2.45
RNF113AO15541 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
RNF113AO15541 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
RNF113AO15541 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
RNF113AO15541 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
RNF113AO15541 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.35■■■□□ 2.45
RNF113AO15541 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RNF113AO15541 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
RNF113AO15541 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.35■■■□□ 2.45
RNF113AO15541 MIR219A2-201ENST00000608502 1504 ntBASIC30.35■■■□□ 2.45
RNF113AO15541 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RNF113AO15541 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
RNF113AO15541 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
RNF113AO15541 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RNF113AO15541 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
RNF113AO15541 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RNF113AO15541 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
RNF113AO15541 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RNF113AO15541 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
RNF113AO15541 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RNF113AO15541 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RNF113AO15541 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RNF113AO15541 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RNF113AO15541 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RNF113AO15541 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
RNF113AO15541 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
RNF113AO15541 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RNF113AO15541 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RNF113AO15541 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RNF113AO15541 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RNF113AO15541 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RNF113AO15541 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RNF113AO15541 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RNF113AO15541 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
RNF113AO15541 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
RNF113AO15541 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
RNF113AO15541 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
RNF113AO15541 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.28■■■□□ 2.44
RNF113AO15541 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.28■■■□□ 2.44
RNF113AO15541 LINC01003-201ENST00000564834 1764 ntBASIC30.28■■■□□ 2.44
RNF113AO15541 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
RNF113AO15541 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RNF113AO15541 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RNF113AO15541 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
RNF113AO15541 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
RNF113AO15541 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RNF113AO15541 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.26■■■□□ 2.43
RNF113AO15541 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.25■■■□□ 2.43
RNF113AO15541 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.24■■■□□ 2.43
RNF113AO15541 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.24■■■□□ 2.43
RNF113AO15541 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RNF113AO15541 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RNF113AO15541 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.23■■■□□ 2.43
RNF113AO15541 BX255925.1-201ENST00000566954 1854 ntBASIC30.23■■■□□ 2.43
RNF113AO15541 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.22■■■□□ 2.43
RNF113AO15541 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.22■■■□□ 2.43
RNF113AO15541 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.22■■■□□ 2.43
RNF113AO15541 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.22■■■□□ 2.43
RNF113AO15541 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
RNF113AO15541 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RNF113AO15541 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
RNF113AO15541 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.21■■■□□ 2.43
RNF113AO15541 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.21■■■□□ 2.43
RNF113AO15541 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RNF113AO15541 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
RNF113AO15541 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
RNF113AO15541 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
RNF113AO15541 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms