Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDX4O14627 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.84■■□□□ 1.57
CDX4O14627 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDX4O14627 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDX4O14627 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.83■■□□□ 1.57
CDX4O14627 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDX4O14627 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.82■■□□□ 1.56
CDX4O14627 AC019069.1-201ENST00000610008 1333 ntBASIC24.82■■□□□ 1.56
CDX4O14627 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CDX4O14627 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDX4O14627 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CDX4O14627 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC24.81■■□□□ 1.56
CDX4O14627 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.81■■□□□ 1.56
CDX4O14627 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CDX4O14627 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDX4O14627 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDX4O14627 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDX4O14627 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDX4O14627 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDX4O14627 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDX4O14627 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDX4O14627 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDX4O14627 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.79■■□□□ 1.56
CDX4O14627 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDX4O14627 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDX4O14627 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDX4O14627 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CDX4O14627 SMPD5-203ENST00000639008 1464 ntBASIC24.77■■□□□ 1.56
CDX4O14627 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.77■■□□□ 1.56
CDX4O14627 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.77■■□□□ 1.56
CDX4O14627 AC026202.3-201ENST00000600805 1127 ntBASIC24.77■■□□□ 1.56
CDX4O14627 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDX4O14627 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDX4O14627 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.76■■□□□ 1.55
CDX4O14627 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDX4O14627 AL135925.1-201ENST00000605920 1701 ntBASIC24.76■■□□□ 1.55
CDX4O14627 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDX4O14627 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.76■■□□□ 1.55
CDX4O14627 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.76■■□□□ 1.55
CDX4O14627 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
CDX4O14627 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
CDX4O14627 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CDX4O14627 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.75■■□□□ 1.55
CDX4O14627 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDX4O14627 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.74■■□□□ 1.55
CDX4O14627 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.74■■□□□ 1.55
CDX4O14627 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDX4O14627 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CDX4O14627 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.74■■□□□ 1.55
CDX4O14627 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDX4O14627 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDX4O14627 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
CDX4O14627 DUX4L9-201ENST00000449051 1259 ntBASIC24.73■■□□□ 1.55
CDX4O14627 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.73■■□□□ 1.55
CDX4O14627 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDX4O14627 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDX4O14627 AC010980.1-201ENST00000587192 1142 ntBASIC24.72■■□□□ 1.55
CDX4O14627 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDX4O14627 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDX4O14627 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDX4O14627 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.71■■□□□ 1.55
CDX4O14627 BHLHE23-202ENST00000612929 1109 ntBASIC24.71■■□□□ 1.55
CDX4O14627 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
CDX4O14627 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
CDX4O14627 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDX4O14627 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDX4O14627 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDX4O14627 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.7■■□□□ 1.54
CDX4O14627 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDX4O14627 AC009299.2-201ENST00000482477 511 ntBASIC24.7■■□□□ 1.54
CDX4O14627 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.7■■□□□ 1.54
CDX4O14627 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.54
CDX4O14627 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.7■■□□□ 1.54
CDX4O14627 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDX4O14627 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CDX4O14627 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDX4O14627 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.69■■□□□ 1.54
CDX4O14627 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.69■■□□□ 1.54
CDX4O14627 KRT8P33-201ENST00000508125 1423 ntBASIC24.69■■□□□ 1.54
CDX4O14627 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDX4O14627 RP9P-202ENST00000450133 1212 ntBASIC24.68■■□□□ 1.54
CDX4O14627 AC074183.2-201ENST00000623112 922 ntBASIC24.68■■□□□ 1.54
CDX4O14627 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDX4O14627 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CDX4O14627 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CDX4O14627 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDX4O14627 AC131212.1-201ENST00000613771 668 ntBASIC24.66■■□□□ 1.54
CDX4O14627 SPCS2P3-201ENST00000500401 656 ntBASIC24.65■■□□□ 1.54
CDX4O14627 AC025884.2-201ENST00000553429 711 ntBASIC24.65■■□□□ 1.54
CDX4O14627 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDX4O14627 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.65■■□□□ 1.54
CDX4O14627 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDX4O14627 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDX4O14627 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDX4O14627 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDX4O14627 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.64■■□□□ 1.54
CDX4O14627 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDX4O14627 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDX4O14627 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.63■■□□□ 1.53
CDX4O14627 AC103834.1-201ENST00000520383 144 ntBASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms